Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 CKBP1-201ENST00000565489 1086 ntBASIC18.21■□□□□ 0.51
UBE2E3Q969T4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 AP006294.2-201ENST00000641667 209 ntBASIC18.21■□□□□ 0.51
UBE2E3Q969T4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
UBE2E3Q969T4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 AC116562.2-201ENST00000507042 360 ntBASIC18.2■□□□□ 0.5
UBE2E3Q969T4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 KRT8P3-201ENST00000519669 1449 ntBASIC18.2■□□□□ 0.5
UBE2E3Q969T4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 AC093525.10-201ENST00000625130 1569 ntBASIC18.2■□□□□ 0.5
UBE2E3Q969T4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBE2E3Q969T4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 AL355355.2-201ENST00000442321 338 ntBASIC18.19■□□□□ 0.5
UBE2E3Q969T4 AC008040.2-201ENST00000461049 708 ntBASIC18.19■□□□□ 0.5
UBE2E3Q969T4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 AC113410.3-201ENST00000623366 203 ntBASIC18.19■□□□□ 0.5
UBE2E3Q969T4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 AC090340.1-201ENST00000620778 4980 ntBASIC18.19■□□□□ 0.5
UBE2E3Q969T4 CROCCP3-202ENST00000420820 1947 ntBASIC18.19■□□□□ 0.5
UBE2E3Q969T4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2E3Q969T4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UBE2E3Q969T4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms