Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RNF34Q969K3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RNF34Q969K3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF34Q969K3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF34Q969K3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF34Q969K3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF34Q969K3 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.8■□□□□ 0.76
RNF34Q969K3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF34Q969K3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF34Q969K3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF34Q969K3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF34Q969K3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF34Q969K3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF34Q969K3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF34Q969K3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF34Q969K3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF34Q969K3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF34Q969K3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RNF34Q969K3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF34Q969K3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF34Q969K3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF34Q969K3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
RNF34Q969K3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF34Q969K3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF34Q969K3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF34Q969K3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
RNF34Q969K3 IRX1P1-201ENST00000438849 1838 ntBASIC19.79■□□□□ 0.76
RNF34Q969K3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF34Q969K3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF34Q969K3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF34Q969K3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF34Q969K3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF34Q969K3 C2orf69P3-201ENST00000565542 1120 ntBASIC19.79■□□□□ 0.76
RNF34Q969K3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF34Q969K3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RNF34Q969K3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.79■□□□□ 0.76
RNF34Q969K3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF34Q969K3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF34Q969K3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF34Q969K3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
RNF34Q969K3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
RNF34Q969K3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.78■□□□□ 0.76
RNF34Q969K3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF34Q969K3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF34Q969K3 NAPSB-206ENST00000562112 1266 ntBASIC19.78■□□□□ 0.76
RNF34Q969K3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF34Q969K3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RNF34Q969K3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF34Q969K3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF34Q969K3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RNF34Q969K3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF34Q969K3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF34Q969K3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF34Q969K3 FP475955.4-201ENST00000623131 1990 ntBASIC19.77■□□□□ 0.76
RNF34Q969K3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF34Q969K3 KRT8P9-201ENST00000558927 1449 ntBASIC19.77■□□□□ 0.76
RNF34Q969K3 FEM1AP3-201ENST00000403722 1741 ntBASIC19.77■□□□□ 0.76
RNF34Q969K3 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.77■□□□□ 0.76
RNF34Q969K3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF34Q969K3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF34Q969K3 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.77■□□□□ 0.76
RNF34Q969K3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF34Q969K3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF34Q969K3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RNF34Q969K3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF34Q969K3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms