Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ARHGEF40Q8TER5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
ARHGEF40Q8TER5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 BID-212ENST00000614949 1988 ntTSL 5 BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 GUSBP12-201ENST00000513727 720 ntBASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC28.06■■■□□ 2.08
ARHGEF40Q8TER5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 MIR940-201ENST00000401276 94 ntBASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 HNRNPA1P28-201ENST00000424481 961 ntBASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 AC004967.1-201ENST00000453589 447 ntBASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC28.05■■■□□ 2.08
ARHGEF40Q8TER5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 MINOS1P3-201ENST00000457048 203 ntBASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 SCARNA2-201ENST00000458748 420 ntBASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGEF40Q8TER5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 HNRNPDP1-201ENST00000439535 754 ntBASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 FAM197Y3-203ENST00000618346 717 ntBASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 EP400NL-214ENST00000641289 2402 ntBASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGEF40Q8TER5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 AC034105.1-201ENST00000563488 319 ntBASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 AL355877.3-201ENST00000622820 899 ntBASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF40Q8TER5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC28.01■■■□□ 2.08
ARHGEF40Q8TER5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
ARHGEF40Q8TER5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.08
ARHGEF40Q8TER5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.08
ARHGEF40Q8TER5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
ARHGEF40Q8TER5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
ARHGEF40Q8TER5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms