Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 IER3-202ENST00000376377 1350 ntBASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 LINC01311-201ENST00000565162 1445 ntBASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 AC093484.2-201ENST00000580996 2166 ntBASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 SPDYE13P-201ENST00000445314 798 ntBASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 ZNF444P1-201ENST00000559497 298 ntBASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 AC008556.1-201ENST00000610908 2040 ntBASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SH3RF3Q8TEJ3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 RASA4DP-201ENST00000460726 1199 ntBASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 AC092597.1-201ENST00000487352 616 ntBASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 AC116407.4-201ENST00000623319 1061 ntBASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SH3RF3Q8TEJ3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 AL032819.2-201ENST00000624543 2162 ntBASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 SEC1P-202ENST00000473944 940 ntBASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 VENTXP5-201ENST00000523979 775 ntBASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.46■■□□□ 1.19
SH3RF3Q8TEJ3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.45■■□□□ 1.19
SH3RF3Q8TEJ3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 FP475955.4-201ENST00000623131 1990 ntBASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms