Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 AC025062.2-201ENST00000605477 670 ntBASIC17.06■□□□□ 0.32
CHD6Q8TD26 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD6Q8TD26 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.05■□□□□ 0.32
CHD6Q8TD26 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 ELL2P1-201ENST00000413990 1906 ntBASIC17.05■□□□□ 0.32
CHD6Q8TD26 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.05■□□□□ 0.32
CHD6Q8TD26 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHD6Q8TD26 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
CHD6Q8TD26 AC009947.1-201ENST00000444350 727 ntBASIC17.05■□□□□ 0.32
CHD6Q8TD26 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD6Q8TD26 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD6Q8TD26 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CHD6Q8TD26 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD6Q8TD26 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.04■□□□□ 0.32
CHD6Q8TD26 AP005117.1-201ENST00000584346 1413 ntBASIC17.04■□□□□ 0.32
CHD6Q8TD26 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD6Q8TD26 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD6Q8TD26 AC093214.1-201ENST00000511688 1107 ntBASIC17.04■□□□□ 0.32
CHD6Q8TD26 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.04■□□□□ 0.32
CHD6Q8TD26 AC011840.4-201ENST00000578471 627 ntBASIC17.04■□□□□ 0.32
CHD6Q8TD26 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CHD6Q8TD26 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD6Q8TD26 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHD6Q8TD26 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CHD6Q8TD26 MIR661-201ENST00000384842 89 ntBASIC17.04■□□□□ 0.32
CHD6Q8TD26 PMS2P4-201ENST00000412466 1052 ntBASIC17.04■□□□□ 0.32
CHD6Q8TD26 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD6Q8TD26 OR7E14P-202ENST00000530490 1290 ntBASIC17.04■□□□□ 0.32
CHD6Q8TD26 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.04■□□□□ 0.32
CHD6Q8TD26 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.04■□□□□ 0.32
CHD6Q8TD26 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD6Q8TD26 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD6Q8TD26 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHD6Q8TD26 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD6Q8TD26 GUSBP12-201ENST00000513727 720 ntBASIC17.03■□□□□ 0.32
CHD6Q8TD26 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.03■□□□□ 0.32
CHD6Q8TD26 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD6Q8TD26 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHD6Q8TD26 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHD6Q8TD26 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHD6Q8TD26 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD6Q8TD26 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD6Q8TD26 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.03■□□□□ 0.32
CHD6Q8TD26 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.03■□□□□ 0.32
CHD6Q8TD26 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.03■□□□□ 0.32
CHD6Q8TD26 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.03■□□□□ 0.32
CHD6Q8TD26 AL513190.1-201ENST00000621254 727 ntBASIC17.03■□□□□ 0.32
CHD6Q8TD26 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHD6Q8TD26 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD6Q8TD26 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHD6Q8TD26 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHD6Q8TD26 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD6Q8TD26 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD6Q8TD26 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CHD6Q8TD26 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD6Q8TD26 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.02■□□□□ 0.32
CHD6Q8TD26 KRT18P2-201ENST00000447938 1258 ntBASIC17.02■□□□□ 0.32
CHD6Q8TD26 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHD6Q8TD26 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
CHD6Q8TD26 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHD6Q8TD26 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.02■□□□□ 0.31
CHD6Q8TD26 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.02■□□□□ 0.31
CHD6Q8TD26 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHD6Q8TD26 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.02■□□□□ 0.31
CHD6Q8TD26 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHD6Q8TD26 AC092865.6-201ENST00000642101 219 ntBASIC17.02■□□□□ 0.31
CHD6Q8TD26 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.02■□□□□ 0.31
CHD6Q8TD26 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHD6Q8TD26 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHD6Q8TD26 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD6Q8TD26 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms