Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 MIR718-201ENST00000390190 70 ntBASIC20.3■□□□□ 0.84
LMO3Q8TAP4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMO3Q8TAP4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 AC009113.1-201ENST00000570267 2443 ntBASIC20.29■□□□□ 0.84
LMO3Q8TAP4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 RBM17P1-201ENST00000453646 1190 ntBASIC20.29■□□□□ 0.84
LMO3Q8TAP4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 AC104581.1-202ENST00000635932 2618 ntBASIC20.29■□□□□ 0.84
LMO3Q8TAP4 AC079598.2-202ENST00000546624 1451 ntBASIC20.29■□□□□ 0.84
LMO3Q8TAP4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LMO3Q8TAP4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 AP005242.2-201ENST00000580065 1175 ntBASIC20.28■□□□□ 0.84
LMO3Q8TAP4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMO3Q8TAP4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 SNORA78-201ENST00000459373 127 ntBASIC20.27■□□□□ 0.84
LMO3Q8TAP4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 AP006294.2-201ENST00000641667 209 ntBASIC20.27■□□□□ 0.84
LMO3Q8TAP4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMO3Q8TAP4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
LMO3Q8TAP4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
LMO3Q8TAP4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LMO3Q8TAP4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LMO3Q8TAP4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LMO3Q8TAP4 RCC2P3-201ENST00000418112 1537 ntBASIC20.27■□□□□ 0.83
LMO3Q8TAP4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
LMO3Q8TAP4 AL499627.1-201ENST00000569373 2188 ntBASIC20.27■□□□□ 0.83
LMO3Q8TAP4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms