Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 FAM87A-204ENST00000613235 858 ntBASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDND2Q8NHS1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CLDND2Q8NHS1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.08■□□□□ 0.17
CLDND2Q8NHS1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.08■□□□□ 0.17
CLDND2Q8NHS1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDND2Q8NHS1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.08■□□□□ 0.17
CLDND2Q8NHS1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 CCR12P-201ENST00000446203 998 ntBASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 AC116562.4-202ENST00000641738 218 ntBASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDND2Q8NHS1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 AC104076.2-201ENST00000448912 469 ntBASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 DUX4L26-201ENST00000489078 1255 ntBASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDND2Q8NHS1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms