Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.12■□□□□ 0.97
USP38Q8NB14 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.12■□□□□ 0.97
USP38Q8NB14 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.12■□□□□ 0.97
USP38Q8NB14 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.12■□□□□ 0.97
USP38Q8NB14 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.12■□□□□ 0.97
USP38Q8NB14 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.12■□□□□ 0.97
USP38Q8NB14 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
USP38Q8NB14 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
USP38Q8NB14 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.12■□□□□ 0.97
USP38Q8NB14 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.11■□□□□ 0.97
USP38Q8NB14 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP38Q8NB14 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
USP38Q8NB14 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.11■□□□□ 0.97
USP38Q8NB14 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP38Q8NB14 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.11■□□□□ 0.97
USP38Q8NB14 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP38Q8NB14 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
USP38Q8NB14 AL671277.2-201ENST00000458060 996 ntBASIC21.11■□□□□ 0.97
USP38Q8NB14 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.11■□□□□ 0.97
USP38Q8NB14 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.11■□□□□ 0.97
USP38Q8NB14 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP38Q8NB14 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.11■□□□□ 0.97
USP38Q8NB14 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.11■□□□□ 0.97
USP38Q8NB14 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP38Q8NB14 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
USP38Q8NB14 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP38Q8NB14 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
USP38Q8NB14 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.11■□□□□ 0.97
USP38Q8NB14 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP38Q8NB14 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.11■□□□□ 0.97
USP38Q8NB14 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP38Q8NB14 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP38Q8NB14 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.1■□□□□ 0.97
USP38Q8NB14 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
USP38Q8NB14 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
USP38Q8NB14 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.1■□□□□ 0.97
USP38Q8NB14 PRSS44-201ENST00000515154 1146 ntBASIC21.1■□□□□ 0.97
USP38Q8NB14 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.1■□□□□ 0.97
USP38Q8NB14 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.1■□□□□ 0.97
USP38Q8NB14 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 RN7SL510P-201ENST00000581311 263 ntBASIC21.1■□□□□ 0.97
USP38Q8NB14 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.1■□□□□ 0.97
USP38Q8NB14 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
USP38Q8NB14 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
USP38Q8NB14 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.1■□□□□ 0.97
USP38Q8NB14 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
USP38Q8NB14 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP38Q8NB14 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
USP38Q8NB14 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP38Q8NB14 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP38Q8NB14 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.09■□□□□ 0.97
USP38Q8NB14 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP38Q8NB14 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
USP38Q8NB14 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.09■□□□□ 0.97
USP38Q8NB14 AL359075.1-203ENST00000462729 1002 ntBASIC21.09■□□□□ 0.97
USP38Q8NB14 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.09■□□□□ 0.97
USP38Q8NB14 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.09■□□□□ 0.97
USP38Q8NB14 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.09■□□□□ 0.97
USP38Q8NB14 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.09■□□□□ 0.97
USP38Q8NB14 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
USP38Q8NB14 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.09■□□□□ 0.97
USP38Q8NB14 TREX1-205ENST00000625293 1783 ntBASIC21.09■□□□□ 0.97
USP38Q8NB14 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.09■□□□□ 0.97
USP38Q8NB14 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP38Q8NB14 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP38Q8NB14 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP38Q8NB14 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
USP38Q8NB14 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP38Q8NB14 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
USP38Q8NB14 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP38Q8NB14 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP38Q8NB14 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
USP38Q8NB14 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
USP38Q8NB14 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP38Q8NB14 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.08■□□□□ 0.97
USP38Q8NB14 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP38Q8NB14 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP38Q8NB14 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.08■□□□□ 0.97
USP38Q8NB14 LINC01465-201ENST00000408887 1940 ntBASIC21.08■□□□□ 0.97
USP38Q8NB14 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms