Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.83■□□□□ 0.93
NME8Q8N427 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NME8Q8N427 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.83■□□□□ 0.92
NME8Q8N427 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
NME8Q8N427 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NME8Q8N427 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NME8Q8N427 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NME8Q8N427 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NME8Q8N427 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NME8Q8N427 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NME8Q8N427 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.82■□□□□ 0.92
NME8Q8N427 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NME8Q8N427 TREX1-205ENST00000625293 1783 ntBASIC20.82■□□□□ 0.92
NME8Q8N427 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NME8Q8N427 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NME8Q8N427 AC005332.1-201ENST00000577698 1310 ntBASIC20.82■□□□□ 0.92
NME8Q8N427 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.82■□□□□ 0.92
NME8Q8N427 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.82■□□□□ 0.92
NME8Q8N427 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NME8Q8N427 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.82■□□□□ 0.92
NME8Q8N427 PCDHAC2-203ENST00000615316 3011 ntBASIC20.82■□□□□ 0.92
NME8Q8N427 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NME8Q8N427 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NME8Q8N427 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.82■□□□□ 0.92
NME8Q8N427 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NME8Q8N427 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NME8Q8N427 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.82■□□□□ 0.92
NME8Q8N427 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NME8Q8N427 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.82■□□□□ 0.92
NME8Q8N427 ZNF444P1-201ENST00000559497 298 ntBASIC20.82■□□□□ 0.92
NME8Q8N427 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
NME8Q8N427 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NME8Q8N427 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NME8Q8N427 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.82■□□□□ 0.92
NME8Q8N427 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NME8Q8N427 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NME8Q8N427 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
NME8Q8N427 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.81■□□□□ 0.92
NME8Q8N427 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NME8Q8N427 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NME8Q8N427 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.81■□□□□ 0.92
NME8Q8N427 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.81■□□□□ 0.92
NME8Q8N427 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.81■□□□□ 0.92
NME8Q8N427 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NME8Q8N427 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.81■□□□□ 0.92
NME8Q8N427 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NME8Q8N427 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NME8Q8N427 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
NME8Q8N427 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.8■□□□□ 0.92
NME8Q8N427 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.8■□□□□ 0.92
NME8Q8N427 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.8■□□□□ 0.92
NME8Q8N427 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
NME8Q8N427 Z82202.1-201ENST00000623446 1880 ntBASIC20.8■□□□□ 0.92
NME8Q8N427 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 MCCD1P1-208ENST00000445732 328 ntBASIC20.8■□□□□ 0.92
NME8Q8N427 AC034232.1-201ENST00000506026 1064 ntBASIC20.8■□□□□ 0.92
NME8Q8N427 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.8■□□□□ 0.92
NME8Q8N427 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.8■□□□□ 0.92
NME8Q8N427 MIR3180-5-201ENST00000583743 153 ntBASIC20.8■□□□□ 0.92
NME8Q8N427 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.8■□□□□ 0.92
NME8Q8N427 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.8■□□□□ 0.92
NME8Q8N427 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.8■□□□□ 0.92
NME8Q8N427 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NME8Q8N427 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
NME8Q8N427 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NME8Q8N427 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NME8Q8N427 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME8Q8N427 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.79■□□□□ 0.92
NME8Q8N427 LINC01311-201ENST00000565162 1445 ntBASIC20.79■□□□□ 0.92
NME8Q8N427 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.79■□□□□ 0.92
NME8Q8N427 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME8Q8N427 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NME8Q8N427 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms