Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 EMD-201ENST00000369835 966 ntTSL 3 BASIC28.07■■■□□ 2.08
ABCA6Q8N139 TLE1-202ENST00000376484 666 ntTSL 3 BASIC28.07■■■□□ 2.08
ABCA6Q8N139 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC28.07■■■□□ 2.08
ABCA6Q8N139 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC28.07■■■□□ 2.08
ABCA6Q8N139 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC28.07■■■□□ 2.08
ABCA6Q8N139 AC148477.8-201ENST00000624298 468 ntBASIC28.07■■■□□ 2.08
ABCA6Q8N139 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA6Q8N139 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
ABCA6Q8N139 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA6Q8N139 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA6Q8N139 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC28.06■■■□□ 2.08
ABCA6Q8N139 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA6Q8N139 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
ABCA6Q8N139 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
ABCA6Q8N139 IGHGP-201ENST00000390555 1178 ntBASIC28.06■■■□□ 2.08
ABCA6Q8N139 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA6Q8N139 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC28.06■■■□□ 2.08
ABCA6Q8N139 KRT18P67-201ENST00000432816 1264 ntBASIC28.06■■■□□ 2.08
ABCA6Q8N139 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC28.06■■■□□ 2.08
ABCA6Q8N139 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC28.05■■■□□ 2.08
ABCA6Q8N139 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
ABCA6Q8N139 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ABCA6Q8N139 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC28.05■■■□□ 2.08
ABCA6Q8N139 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
ABCA6Q8N139 BNIP3P18-201ENST00000593976 575 ntBASIC28.05■■■□□ 2.08
ABCA6Q8N139 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC28.05■■■□□ 2.08
ABCA6Q8N139 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC28.05■■■□□ 2.08
ABCA6Q8N139 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ABCA6Q8N139 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC28.05■■■□□ 2.08
ABCA6Q8N139 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
ABCA6Q8N139 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC28.05■■■□□ 2.08
ABCA6Q8N139 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
ABCA6Q8N139 RCC2P3-201ENST00000418112 1537 ntBASIC28.04■■■□□ 2.08
ABCA6Q8N139 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ABCA6Q8N139 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
ABCA6Q8N139 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ABCA6Q8N139 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ABCA6Q8N139 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC28.04■■■□□ 2.08
ABCA6Q8N139 KRT18P58-201ENST00000527480 1120 ntBASIC28.04■■■□□ 2.08
ABCA6Q8N139 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ABCA6Q8N139 CCNC-219ENST00000627680 896 ntTSL 5 BASIC28.04■■■□□ 2.08
ABCA6Q8N139 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC28.04■■■□□ 2.08
ABCA6Q8N139 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ABCA6Q8N139 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC28.04■■■□□ 2.08
ABCA6Q8N139 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ABCA6Q8N139 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC28.04■■■□□ 2.08
ABCA6Q8N139 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC28.04■■■□□ 2.08
ABCA6Q8N139 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC28.04■■■□□ 2.08
ABCA6Q8N139 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ABCA6Q8N139 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC28.03■■■□□ 2.08
ABCA6Q8N139 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ABCA6Q8N139 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC28.03■■■□□ 2.08
ABCA6Q8N139 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ABCA6Q8N139 PBK-203ENST00000522944 1499 ntTSL 2 BASIC28.03■■■□□ 2.08
ABCA6Q8N139 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ABCA6Q8N139 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ABCA6Q8N139 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC28.03■■■□□ 2.08
ABCA6Q8N139 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ABCA6Q8N139 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
ABCA6Q8N139 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
ABCA6Q8N139 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
ABCA6Q8N139 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ABCA6Q8N139 MIR1233-2-201ENST00000408138 82 ntBASIC28.03■■■□□ 2.08
ABCA6Q8N139 MIR1233-1-201ENST00000408722 82 ntBASIC28.03■■■□□ 2.08
ABCA6Q8N139 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC28.03■■■□□ 2.08
ABCA6Q8N139 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC28.03■■■□□ 2.08
ABCA6Q8N139 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ABCA6Q8N139 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ABCA6Q8N139 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ABCA6Q8N139 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
ABCA6Q8N139 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC28.02■■■□□ 2.08
ABCA6Q8N139 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC28.02■■■□□ 2.08
ABCA6Q8N139 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC28.02■■■□□ 2.08
ABCA6Q8N139 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC28.01■■■□□ 2.08
ABCA6Q8N139 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ABCA6Q8N139 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ABCA6Q8N139 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
ABCA6Q8N139 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.07
ABCA6Q8N139 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
ABCA6Q8N139 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC28.01■■■□□ 2.07
ABCA6Q8N139 RN7SL606P-201ENST00000472779 293 ntBASIC28.01■■■□□ 2.07
ABCA6Q8N139 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC28.01■■■□□ 2.07
ABCA6Q8N139 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC28.01■■■□□ 2.07
ABCA6Q8N139 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ABCA6Q8N139 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC28.01■■■□□ 2.07
ABCA6Q8N139 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC28.01■■■□□ 2.07
ABCA6Q8N139 AL109659.2-201ENST00000606809 1674 ntBASIC28.01■■■□□ 2.07
ABCA6Q8N139 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC28.01■■■□□ 2.07
ABCA6Q8N139 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC28.01■■■□□ 2.07
ABCA6Q8N139 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
ABCA6Q8N139 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC28.01■■■□□ 2.07
ABCA6Q8N139 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC28.01■■■□□ 2.07
ABCA6Q8N139 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
ABCA6Q8N139 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
ABCA6Q8N139 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC28■■■□□ 2.07
ABCA6Q8N139 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC28■■■□□ 2.07
ABCA6Q8N139 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC28■■■□□ 2.07
ABCA6Q8N139 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms