Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CPNE9Q8IYJ1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 KRT8P11-201ENST00000409686 1436 ntBASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE9Q8IYJ1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 AC091390.4-202ENST00000476426 537 ntBASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 AL031985.4-201ENST00000642138 673 ntBASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CPNE9Q8IYJ1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 AC004951.3-201ENST00000418645 1148 ntBASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 FAM197Y1-201ENST00000421178 764 ntBASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 AC026271.3-201ENST00000571884 352 ntBASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE9Q8IYJ1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 UBE2SP1-201ENST00000450587 669 ntBASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE9Q8IYJ1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms