Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LYSMD2Q8IV50 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 PGM5P4-201ENST00000421970 445 ntBASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 AC022211.2-201ENST00000585075 2527 ntBASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LYSMD2Q8IV50 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LYSMD2Q8IV50 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 AC097381.1-201ENST00000429019 1296 ntBASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 AC019069.1-201ENST00000610008 1333 ntBASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
LYSMD2Q8IV50 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 CICP6-201ENST00000457191 2729 ntBASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms