Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 NIFKP9-201ENST00000419265 221 ntBASIC12.52□□□□□ -0.41
SCXQ7RTU7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 RBM17P1-201ENST00000453646 1190 ntBASIC12.52□□□□□ -0.41
SCXQ7RTU7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 AC012306.2-201ENST00000609350 630 ntBASIC12.52□□□□□ -0.41
SCXQ7RTU7 REXO1L10P-201ENST00000615707 1290 ntBASIC12.52□□□□□ -0.41
SCXQ7RTU7 CR392000.1-201ENST00000624770 1228 ntBASIC12.52□□□□□ -0.41
SCXQ7RTU7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCXQ7RTU7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCXQ7RTU7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCXQ7RTU7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCXQ7RTU7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCXQ7RTU7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCXQ7RTU7 AP006587.1-201ENST00000534129 1502 ntBASIC12.52□□□□□ -0.41
SCXQ7RTU7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCXQ7RTU7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCXQ7RTU7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCXQ7RTU7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SCXQ7RTU7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SCXQ7RTU7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SCXQ7RTU7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 AC007225.1-201ENST00000566331 1836 ntBASIC12.51□□□□□ -0.41
SCXQ7RTU7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 UNC93B2-201ENST00000285383 730 ntBASIC12.51□□□□□ -0.41
SCXQ7RTU7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 KSR1P1-201ENST00000446298 240 ntBASIC12.51□□□□□ -0.41
SCXQ7RTU7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 AP000525.1-201ENST00000608286 694 ntBASIC12.51□□□□□ -0.41
SCXQ7RTU7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 KRT16P1-201ENST00000399124 1418 ntBASIC12.51□□□□□ -0.41
SCXQ7RTU7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SCXQ7RTU7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
SCXQ7RTU7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms