Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 MRPL3P1-201ENST00000400109 1033 ntBASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 CHCHD2P8-201ENST00000429873 447 ntBASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 AC034232.1-201ENST00000506026 1064 ntBASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 LINC01711-201ENST00000598340 967 ntBASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
OTOP1Q7RTM1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 MIR4674-201ENST00000582457 87 ntBASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 BX640515.1-201ENST00000617215 977 ntBASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
OTOP1Q7RTM1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 KRT18P31-201ENST00000506277 1292 ntBASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 FOSL1P1-201ENST00000511041 816 ntBASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OTOP1Q7RTM1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
OTOP1Q7RTM1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
OTOP1Q7RTM1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
OTOP1Q7RTM1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.89■■□□□ 1.1
OTOP1Q7RTM1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 TREX1-205ENST00000625293 1783 ntBASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
OTOP1Q7RTM1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
OTOP1Q7RTM1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms