Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 AC246785.2-201ENST00000432512 513 ntBASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 RN7SL510P-201ENST00000581311 263 ntBASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 AC024243.1-201ENST00000609234 778 ntBASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC149Q6ZUS6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 AC004870.1-201ENST00000315132 882 ntBASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 TSSC2-201ENST00000450217 709 ntBASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC149Q6ZUS6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 BX276092.5-203ENST00000456199 560 ntBASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 AL121672.3-201ENST00000608644 468 ntBASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC149Q6ZUS6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 AC092597.1-201ENST00000487352 616 ntBASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC149Q6ZUS6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms