Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF43Q68DV7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF43Q68DV7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF43Q68DV7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF43Q68DV7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RNF43Q68DV7 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.84■□□□□ 0.77
RNF43Q68DV7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF43Q68DV7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF43Q68DV7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF43Q68DV7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF43Q68DV7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF43Q68DV7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF43Q68DV7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF43Q68DV7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF43Q68DV7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 SLC25A3P1-201ENST00000443844 931 ntBASIC19.84■□□□□ 0.77
RNF43Q68DV7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF43Q68DV7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF43Q68DV7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF43Q68DV7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF43Q68DV7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF43Q68DV7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF43Q68DV7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF43Q68DV7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF43Q68DV7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF43Q68DV7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.83■□□□□ 0.77
RNF43Q68DV7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF43Q68DV7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF43Q68DV7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RNF43Q68DV7 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.83■□□□□ 0.77
RNF43Q68DV7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF43Q68DV7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RNF43Q68DV7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF43Q68DV7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF43Q68DV7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF43Q68DV7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF43Q68DV7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF43Q68DV7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF43Q68DV7 AC073508.3-201ENST00000619697 1419 ntBASIC19.83■□□□□ 0.76
RNF43Q68DV7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RNF43Q68DV7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF43Q68DV7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF43Q68DV7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF43Q68DV7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF43Q68DV7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RNF43Q68DV7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF43Q68DV7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RNF43Q68DV7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF43Q68DV7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF43Q68DV7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF43Q68DV7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF43Q68DV7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF43Q68DV7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF43Q68DV7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF43Q68DV7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF43Q68DV7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF43Q68DV7 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.81■□□□□ 0.76
RNF43Q68DV7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF43Q68DV7 TSPY14P-201ENST00000303979 915 ntBASIC19.81■□□□□ 0.76
RNF43Q68DV7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF43Q68DV7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF43Q68DV7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF43Q68DV7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 AC104076.2-201ENST00000448912 469 ntBASIC19.81■□□□□ 0.76
RNF43Q68DV7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF43Q68DV7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF43Q68DV7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF43Q68DV7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF43Q68DV7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms