Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 AC079781.3-201ENST00000449110 356 ntBASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LYSMD4Q5XG99 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 AC090616.6-201ENST00000582640 721 ntBASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 KRT8P7-201ENST00000533003 1432 ntBASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYSMD4Q5XG99 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 AC010240.3-201ENST00000607688 395 ntBASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 GPALPP1-207ENST00000611650 899 ntBASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 AC099778.1-201ENST00000568593 1911 ntBASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYSMD4Q5XG99 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 AP003733.1-201ENST00000491725 852 ntBASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 AC074051.2-201ENST00000565115 352 ntBASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 AC005332.3-201ENST00000589904 676 ntBASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 AC138894.3-201ENST00000603787 634 ntBASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 IGHV3-41-201ENST00000613121 348 ntBASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 AC023511.2-201ENST00000618803 211 ntBASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD4Q5XG99 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms