Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ATPAF1Q5TC12 WIZP1-201ENST00000531444 2299 ntBASIC16.43■□□□□ 0.22
ATPAF1Q5TC12 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATPAF1Q5TC12 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ATPAF1Q5TC12 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.43■□□□□ 0.22
ATPAF1Q5TC12 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATPAF1Q5TC12 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATPAF1Q5TC12 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATPAF1Q5TC12 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.43■□□□□ 0.22
ATPAF1Q5TC12 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 ABHD17AP1-201ENST00000358206 933 ntBASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 KRT18P29-201ENST00000397031 1267 ntBASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 AC133681.1-201ENST00000465482 601 ntBASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF1Q5TC12 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 YBX1P10-201ENST00000444752 975 ntBASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ATPAF1Q5TC12 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ATPAF1Q5TC12 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms