Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 RPS2P32-201ENST00000439199 892 ntBASIC10.35□□□□□ -0.75
UBR4Q5T4S7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 KRT18P2-201ENST00000447938 1258 ntBASIC10.35□□□□□ -0.75
UBR4Q5T4S7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 AC242852.2-201ENST00000615738 1807 ntBASIC10.35□□□□□ -0.75
UBR4Q5T4S7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 PHGDH-210ENST00000641115 1638 ntBASIC10.35□□□□□ -0.75
UBR4Q5T4S7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 NUS1P2-201ENST00000417358 873 ntBASIC10.35□□□□□ -0.75
UBR4Q5T4S7 TSEN15P1-201ENST00000423257 515 ntBASIC10.35□□□□□ -0.75
UBR4Q5T4S7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 AL513190.1-201ENST00000621254 727 ntBASIC10.35□□□□□ -0.75
UBR4Q5T4S7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC10.35□□□□□ -0.75
UBR4Q5T4S7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 LINC00628-201ENST00000628516 1289 ntBASIC10.34□□□□□ -0.75
UBR4Q5T4S7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 AL121603.2-201ENST00000557373 2117 ntBASIC10.34□□□□□ -0.75
UBR4Q5T4S7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 HAUS4P1-201ENST00000406739 1145 ntBASIC10.34□□□□□ -0.75
UBR4Q5T4S7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC10.34□□□□□ -0.75
UBR4Q5T4S7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC10.34□□□□□ -0.75
UBR4Q5T4S7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 CEND1P1-201ENST00000451006 455 ntBASIC10.33□□□□□ -0.76
UBR4Q5T4S7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 GPAT2P1-201ENST00000444924 1672 ntBASIC10.33□□□□□ -0.76
UBR4Q5T4S7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms