Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 HOXB1-202ENST00000577092 1414 ntBASIC30.95■■■□□ 2.55
SNAPC4Q5SXM2 AL691432.2-201ENST00000607222 2038 ntBASIC30.95■■■□□ 2.55
SNAPC4Q5SXM2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
SNAPC4Q5SXM2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SNAPC4Q5SXM2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC30.95■■■□□ 2.54
SNAPC4Q5SXM2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC30.95■■■□□ 2.54
SNAPC4Q5SXM2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC30.95■■■□□ 2.54
SNAPC4Q5SXM2 AC055717.3-201ENST00000622967 595 ntBASIC30.95■■■□□ 2.54
SNAPC4Q5SXM2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 PMS2P2-201ENST00000425039 1128 ntBASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 VENTXP7-201ENST00000475503 772 ntBASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 AC124864.1-201ENST00000623408 392 ntBASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 SDHAP1-207ENST00000440850 2000 ntBASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SNAPC4Q5SXM2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 AC139887.3-201ENST00000568585 713 ntBASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 AC008608.2-201ENST00000606089 416 ntBASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC30.93■■■□□ 2.54
SNAPC4Q5SXM2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNAPC4Q5SXM2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
SNAPC4Q5SXM2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNAPC4Q5SXM2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC30.91■■■□□ 2.54
SNAPC4Q5SXM2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNAPC4Q5SXM2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNAPC4Q5SXM2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNAPC4Q5SXM2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNAPC4Q5SXM2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC30.91■■■□□ 2.54
SNAPC4Q5SXM2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SNAPC4Q5SXM2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNAPC4Q5SXM2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SNAPC4Q5SXM2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC30.9■■■□□ 2.54
SNAPC4Q5SXM2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC30.9■■■□□ 2.54
SNAPC4Q5SXM2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC30.9■■■□□ 2.54
SNAPC4Q5SXM2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC30.9■■■□□ 2.54
SNAPC4Q5SXM2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SNAPC4Q5SXM2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SNAPC4Q5SXM2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
SNAPC4Q5SXM2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
SNAPC4Q5SXM2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC30.9■■■□□ 2.54
SNAPC4Q5SXM2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
SNAPC4Q5SXM2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 RPL13AP23-201ENST00000480739 586 ntBASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 AL139424.1-201ENST00000607572 797 ntBASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SNAPC4Q5SXM2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC30.89■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms