Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 NCF1B-203ENST00000435988 1254 ntBASIC18.18■□□□□ 0.5
PDCD4Q53EL6 TSPY23P-201ENST00000440136 739 ntBASIC18.18■□□□□ 0.5
PDCD4Q53EL6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.18■□□□□ 0.5
PDCD4Q53EL6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.18■□□□□ 0.5
PDCD4Q53EL6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 AC073592.3-201ENST00000625118 1834 ntBASIC18.18■□□□□ 0.5
PDCD4Q53EL6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.18■□□□□ 0.5
PDCD4Q53EL6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 AL160286.2-201ENST00000567150 934 ntBASIC18.17■□□□□ 0.5
PDCD4Q53EL6 AC083880.1-201ENST00000608266 535 ntBASIC18.17■□□□□ 0.5
PDCD4Q53EL6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDCD4Q53EL6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.16■□□□□ 0.5
PDCD4Q53EL6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms