Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 KRT16P1-201ENST00000399124 1418 ntBASIC19.17■□□□□ 0.66
KHDC1Q4VXA5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 AC004980.1-204ENST00000429707 299 ntBASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KHDC1Q4VXA5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 AP001412.1-201ENST00000608405 714 ntBASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 AC135050.7-201ENST00000624508 2218 ntBASIC19.15■□□□□ 0.66
KHDC1Q4VXA5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
KHDC1Q4VXA5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
KHDC1Q4VXA5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KHDC1Q4VXA5 AC020916.1-201ENST00000587762 1774 ntBASIC19.14■□□□□ 0.66
KHDC1Q4VXA5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 TSPY15P-201ENST00000457163 923 ntBASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 ZNF815P-204ENST00000434898 1737 ntBASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 AC104417.2-201ENST00000562989 1793 ntBASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KHDC1Q4VXA5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KHDC1Q4VXA5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms