Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCGF3Q3KNV8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 AP006587.1-201ENST00000534129 1502 ntBASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 AL353807.1-201ENST00000427475 662 ntBASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 AC012618.2-201ENST00000428058 849 ntBASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.77■□□□□ 0.28
PCGF3Q3KNV8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF3Q3KNV8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF3Q3KNV8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF3Q3KNV8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.77■□□□□ 0.27
PCGF3Q3KNV8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF3Q3KNV8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCGF3Q3KNV8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 AL390961.4-201ENST00000623958 2535 ntBASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 AC018553.1-201ENST00000616682 1458 ntBASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCGF3Q3KNV8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 TFP1-202ENST00000475455 1573 ntBASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 AP001271.2-201ENST00000624018 1556 ntBASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCGF3Q3KNV8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 HTR7P1-202ENST00000624664 4411 ntBASIC16.74■□□□□ 0.27
PCGF3Q3KNV8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms