Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 LINC01465-201ENST00000408887 1940 ntBASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTC1Q2NKJ3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 AC006538.3-201ENST00000612495 578 ntBASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CTC1Q2NKJ3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 TSSC2-201ENST00000450217 709 ntBASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTC1Q2NKJ3 AC016734.2-201ENST00000624325 1377 ntBASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 AC004263.2-201ENST00000617183 678 ntBASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 AC023511.2-201ENST00000618803 211 ntBASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTC1Q2NKJ3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CTC1Q2NKJ3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.83
CTC1Q2NKJ3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 AC092720.2-201ENST00000602388 1665 ntBASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms