Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
H3F3AP84243 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.93■□□□□ 0.3
H3F3AP84243 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 MMP23A-201ENST00000234610 1017 ntBASIC16.93■□□□□ 0.3
H3F3AP84243 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
H3F3AP84243 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.93■□□□□ 0.3
H3F3AP84243 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.93■□□□□ 0.3
H3F3AP84243 AL023803.3-201ENST00000615559 522 ntBASIC16.93■□□□□ 0.3
H3F3AP84243 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.93■□□□□ 0.3
H3F3AP84243 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
H3F3AP84243 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.93■□□□□ 0.3
H3F3AP84243 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3F3AP84243 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
H3F3AP84243 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
H3F3AP84243 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
H3F3AP84243 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
H3F3AP84243 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 SLC25A1P2-201ENST00000430693 912 ntBASIC16.92■□□□□ 0.3
H3F3AP84243 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.92■□□□□ 0.3
H3F3AP84243 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.92■□□□□ 0.3
H3F3AP84243 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.92■□□□□ 0.3
H3F3AP84243 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.92■□□□□ 0.3
H3F3AP84243 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
H3F3AP84243 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
H3F3AP84243 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.92■□□□□ 0.3
H3F3AP84243 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
H3F3AP84243 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H3F3AP84243 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
H3F3AP84243 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.91■□□□□ 0.3
H3F3AP84243 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 AP000974.1-201ENST00000623909 2387 ntBASIC16.91■□□□□ 0.3
H3F3AP84243 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.91■□□□□ 0.3
H3F3AP84243 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.91■□□□□ 0.3
H3F3AP84243 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.91■□□□□ 0.3
H3F3AP84243 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.91■□□□□ 0.3
H3F3AP84243 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.91■□□□□ 0.3
H3F3AP84243 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.91■□□□□ 0.3
H3F3AP84243 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.91■□□□□ 0.3
H3F3AP84243 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.91■□□□□ 0.3
H3F3AP84243 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.91■□□□□ 0.3
H3F3AP84243 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
H3F3AP84243 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3F3AP84243 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3AP84243 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.9■□□□□ 0.3
H3F3AP84243 AC006333.2-201ENST00000607957 2099 ntBASIC16.9■□□□□ 0.3
H3F3AP84243 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3AP84243 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
H3F3AP84243 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.9■□□□□ 0.3
H3F3AP84243 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
H3F3AP84243 KRT8P9-201ENST00000558927 1449 ntBASIC16.9■□□□□ 0.3
H3F3AP84243 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3AP84243 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
H3F3AP84243 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3AP84243 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
H3F3AP84243 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
H3F3AP84243 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3F3AP84243 TSPY14P-201ENST00000303979 915 ntBASIC16.9■□□□□ 0.3
H3F3AP84243 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.9■□□□□ 0.3
H3F3AP84243 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.9■□□□□ 0.3
H3F3AP84243 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms