Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ASIC1P78348 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.12■□□□□ 0.97
ASIC1P78348 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ASIC1P78348 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ASIC1P78348 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.12■□□□□ 0.97
ASIC1P78348 AC011506.1-201ENST00000474329 610 ntBASIC21.12■□□□□ 0.97
ASIC1P78348 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.12■□□□□ 0.97
ASIC1P78348 CD177P1-201ENST00000606252 935 ntBASIC21.12■□□□□ 0.97
ASIC1P78348 MIR6786-201ENST00000616843 113 ntBASIC21.12■□□□□ 0.97
ASIC1P78348 AC083906.6-201ENST00000641366 219 ntBASIC21.12■□□□□ 0.97
ASIC1P78348 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
ASIC1P78348 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ASIC1P78348 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ASIC1P78348 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ASIC1P78348 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.12■□□□□ 0.97
ASIC1P78348 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ASIC1P78348 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ASIC1P78348 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ASIC1P78348 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
ASIC1P78348 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.11■□□□□ 0.97
ASIC1P78348 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.11■□□□□ 0.97
ASIC1P78348 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
ASIC1P78348 AL138781.2-201ENST00000617896 1843 ntBASIC21.11■□□□□ 0.97
ASIC1P78348 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.11■□□□□ 0.97
ASIC1P78348 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.11■□□□□ 0.97
ASIC1P78348 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
ASIC1P78348 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.11■□□□□ 0.97
ASIC1P78348 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.11■□□□□ 0.97
ASIC1P78348 B3GAT3P1-201ENST00000471720 806 ntBASIC21.11■□□□□ 0.97
ASIC1P78348 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
ASIC1P78348 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.11■□□□□ 0.97
ASIC1P78348 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.11■□□□□ 0.97
ASIC1P78348 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
ASIC1P78348 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.11■□□□□ 0.97
ASIC1P78348 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.11■□□□□ 0.97
ASIC1P78348 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ASIC1P78348 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.11■□□□□ 0.97
ASIC1P78348 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.1■□□□□ 0.97
ASIC1P78348 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ASIC1P78348 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ASIC1P78348 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ASIC1P78348 AC093525.10-201ENST00000625130 1569 ntBASIC21.1■□□□□ 0.97
ASIC1P78348 AL031598.1-201ENST00000561511 1773 ntBASIC21.1■□□□□ 0.97
ASIC1P78348 AL512353.2-201ENST00000448759 1962 ntBASIC21.1■□□□□ 0.97
ASIC1P78348 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.1■□□□□ 0.97
ASIC1P78348 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ASIC1P78348 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.1■□□□□ 0.97
ASIC1P78348 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ASIC1P78348 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ASIC1P78348 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.1■□□□□ 0.97
ASIC1P78348 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ASIC1P78348 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ASIC1P78348 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ASIC1P78348 FAM207BP-201ENST00000447172 505 ntBASIC21.1■□□□□ 0.97
ASIC1P78348 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.1■□□□□ 0.97
ASIC1P78348 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.1■□□□□ 0.97
ASIC1P78348 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.1■□□□□ 0.97
ASIC1P78348 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
ASIC1P78348 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.1■□□□□ 0.97
ASIC1P78348 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ASIC1P78348 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ASIC1P78348 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ASIC1P78348 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.1■□□□□ 0.97
ASIC1P78348 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ASIC1P78348 AC138932.1-201ENST00000534164 6830 ntBASIC21.09■□□□□ 0.97
ASIC1P78348 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ASIC1P78348 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ASIC1P78348 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ASIC1P78348 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.09■□□□□ 0.97
ASIC1P78348 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.09■□□□□ 0.97
ASIC1P78348 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
ASIC1P78348 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ASIC1P78348 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ASIC1P78348 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ASIC1P78348 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.09■□□□□ 0.97
ASIC1P78348 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ASIC1P78348 RPS2P55-201ENST00000397318 883 ntBASIC21.09■□□□□ 0.97
ASIC1P78348 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.09■□□□□ 0.97
ASIC1P78348 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ASIC1P78348 AC107956.1-201ENST00000494359 873 ntBASIC21.09■□□□□ 0.97
ASIC1P78348 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.09■□□□□ 0.97
ASIC1P78348 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.09■□□□□ 0.97
ASIC1P78348 AC130371.2-201ENST00000619443 611 ntBASIC21.09■□□□□ 0.97
ASIC1P78348 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.09■□□□□ 0.97
ASIC1P78348 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ASIC1P78348 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms