Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB38P57729 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB38P57729 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB38P57729 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB38P57729 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB38P57729 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAB38P57729 AC007663.1-201ENST00000438948 1240 ntBASIC17.8■□□□□ 0.44
RAB38P57729 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB38P57729 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAB38P57729 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.8■□□□□ 0.44
RAB38P57729 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB38P57729 AC008622.2-201ENST00000617006 1229 ntBASIC17.8■□□□□ 0.44
RAB38P57729 AC010653.2-201ENST00000623505 997 ntBASIC17.8■□□□□ 0.44
RAB38P57729 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RAB38P57729 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB38P57729 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB38P57729 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB38P57729 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB38P57729 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB38P57729 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB38P57729 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RAB38P57729 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB38P57729 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB38P57729 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB38P57729 AL512353.2-201ENST00000448759 1962 ntBASIC17.79■□□□□ 0.44
RAB38P57729 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
RAB38P57729 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB38P57729 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB38P57729 AC145285.6-201ENST00000604632 637 ntBASIC17.79■□□□□ 0.44
RAB38P57729 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB38P57729 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB38P57729 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB38P57729 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.78■□□□□ 0.44
RAB38P57729 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RAB38P57729 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAB38P57729 KRT18P22-201ENST00000402024 1347 ntBASIC17.78■□□□□ 0.44
RAB38P57729 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.78■□□□□ 0.44
RAB38P57729 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RAB38P57729 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RAB38P57729 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAB38P57729 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAB38P57729 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
RAB38P57729 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 AP003041.3-201ENST00000527151 707 ntBASIC17.78■□□□□ 0.44
RAB38P57729 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.78■□□□□ 0.44
RAB38P57729 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.78■□□□□ 0.44
RAB38P57729 AC083906.6-201ENST00000641366 219 ntBASIC17.78■□□□□ 0.44
RAB38P57729 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 BX323043.1-201ENST00000641006 1765 ntBASIC17.78■□□□□ 0.44
RAB38P57729 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAB38P57729 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB38P57729 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
RAB38P57729 KRT8P32-201ENST00000512863 1461 ntBASIC17.77■□□□□ 0.44
RAB38P57729 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 INGX-201ENST00000359239 846 ntBASIC17.77■□□□□ 0.44
RAB38P57729 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.77■□□□□ 0.44
RAB38P57729 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.77■□□□□ 0.44
RAB38P57729 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.77■□□□□ 0.44
RAB38P57729 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.77■□□□□ 0.44
RAB38P57729 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.77■□□□□ 0.44
RAB38P57729 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms