Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLDN20P56880 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN20P56880 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN20P56880 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN20P56880 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 AC104417.2-201ENST00000562989 1793 ntBASIC17.35■□□□□ 0.37
CLDN20P56880 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CLDN20P56880 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN20P56880 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN20P56880 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 AC008040.2-201ENST00000461049 708 ntBASIC17.35■□□□□ 0.37
CLDN20P56880 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN20P56880 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN20P56880 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLDN20P56880 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN20P56880 AP000525.1-201ENST00000608286 694 ntBASIC17.35■□□□□ 0.37
CLDN20P56880 AC011298.2-201ENST00000617989 482 ntBASIC17.35■□□□□ 0.37
CLDN20P56880 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLDN20P56880 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN20P56880 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN20P56880 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CLDN20P56880 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLDN20P56880 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLDN20P56880 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN20P56880 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN20P56880 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN20P56880 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLDN20P56880 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN20P56880 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN20P56880 UNC93B2-201ENST00000285383 730 ntBASIC17.34■□□□□ 0.37
CLDN20P56880 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN20P56880 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLDN20P56880 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLDN20P56880 AC004951.3-201ENST00000418645 1148 ntBASIC17.34■□□□□ 0.37
CLDN20P56880 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN20P56880 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLDN20P56880 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN20P56880 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.34■□□□□ 0.37
CLDN20P56880 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN20P56880 AC130371.2-201ENST00000619443 611 ntBASIC17.34■□□□□ 0.37
CLDN20P56880 AC073912.3-201ENST00000624414 853 ntBASIC17.34■□□□□ 0.37
CLDN20P56880 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLDN20P56880 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLDN20P56880 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN20P56880 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN20P56880 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CLDN20P56880 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN20P56880 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CLDN20P56880 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLDN20P56880 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLDN20P56880 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN20P56880 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN20P56880 AC091390.4-202ENST00000476426 537 ntBASIC17.33■□□□□ 0.36
CLDN20P56880 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
CLDN20P56880 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN20P56880 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN20P56880 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN20P56880 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN20P56880 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN20P56880 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN20P56880 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN20P56880 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CLDN20P56880 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN20P56880 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLDN20P56880 SDHAP1-207ENST00000440850 2000 ntBASIC17.33■□□□□ 0.36
CLDN20P56880 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CLDN20P56880 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN20P56880 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN20P56880 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN20P56880 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN20P56880 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CLDN20P56880 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN20P56880 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN20P56880 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN20P56880 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CLDN20P56880 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN20P56880 KRT8P41-201ENST00000533985 1514 ntBASIC17.32■□□□□ 0.36
CLDN20P56880 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN20P56880 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN20P56880 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN20P56880 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN20P56880 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN20P56880 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN20P56880 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms