Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CMC4P56277 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.12□□□□□ -0.15
CMC4P56277 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMC4P56277 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMC4P56277 TEX21P-204ENST00000641479 1693 ntBASIC14.12□□□□□ -0.15
CMC4P56277 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMC4P56277 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CMC4P56277 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.12□□□□□ -0.15
CMC4P56277 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.12□□□□□ -0.15
CMC4P56277 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMC4P56277 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.12□□□□□ -0.15
CMC4P56277 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.12□□□□□ -0.15
CMC4P56277 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.12□□□□□ -0.15
CMC4P56277 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMC4P56277 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMC4P56277 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMC4P56277 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMC4P56277 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMC4P56277 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMC4P56277 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CMC4P56277 HTR7P1-202ENST00000624664 4411 ntBASIC14.12□□□□□ -0.15
CMC4P56277 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CMC4P56277 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.12□□□□□ -0.15
CMC4P56277 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CMC4P56277 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CMC4P56277 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 LINC01568-207ENST00000641790 1380 ntBASIC14.11□□□□□ -0.15
CMC4P56277 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.11□□□□□ -0.15
CMC4P56277 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.11□□□□□ -0.15
CMC4P56277 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.11□□□□□ -0.15
CMC4P56277 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CMC4P56277 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.11□□□□□ -0.15
CMC4P56277 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.11□□□□□ -0.15
CMC4P56277 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.11□□□□□ -0.15
CMC4P56277 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CMC4P56277 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.11□□□□□ -0.15
CMC4P56277 LINC01023-201ENST00000606054 436 ntBASIC14.11□□□□□ -0.15
CMC4P56277 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.11□□□□□ -0.15
CMC4P56277 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.11□□□□□ -0.15
CMC4P56277 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.11□□□□□ -0.15
CMC4P56277 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.11□□□□□ -0.15
CMC4P56277 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CMC4P56277 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMC4P56277 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.11□□□□□ -0.15
CMC4P56277 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.1□□□□□ -0.15
CMC4P56277 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 AC120498.9-201ENST00000339021 3867 ntBASIC14.1□□□□□ -0.15
CMC4P56277 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.1□□□□□ -0.15
CMC4P56277 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.1□□□□□ -0.15
CMC4P56277 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.1□□□□□ -0.15
CMC4P56277 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.1□□□□□ -0.15
CMC4P56277 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.1□□□□□ -0.15
CMC4P56277 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.1□□□□□ -0.15
CMC4P56277 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CMC4P56277 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.1□□□□□ -0.15
CMC4P56277 IRX1P1-201ENST00000438849 1838 ntBASIC14.1□□□□□ -0.15
CMC4P56277 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
CMC4P56277 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.1□□□□□ -0.15
CMC4P56277 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.1□□□□□ -0.15
CMC4P56277 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CMC4P56277 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.1□□□□□ -0.15
CMC4P56277 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMC4P56277 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms