Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.78■□□□□ 0.76
EPHB3P54753 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.78■□□□□ 0.76
EPHB3P54753 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.78■□□□□ 0.76
EPHB3P54753 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
EPHB3P54753 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.78■□□□□ 0.76
EPHB3P54753 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.78■□□□□ 0.76
EPHB3P54753 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.78■□□□□ 0.76
EPHB3P54753 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
EPHB3P54753 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB3P54753 AC125437.2-201ENST00000625180 2167 ntBASIC19.77■□□□□ 0.76
EPHB3P54753 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB3P54753 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB3P54753 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB3P54753 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB3P54753 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB3P54753 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB3P54753 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
EPHB3P54753 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
EPHB3P54753 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB3P54753 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.77■□□□□ 0.76
EPHB3P54753 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB3P54753 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.77■□□□□ 0.76
EPHB3P54753 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.77■□□□□ 0.76
EPHB3P54753 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB3P54753 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.77■□□□□ 0.76
EPHB3P54753 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB3P54753 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.77■□□□□ 0.76
EPHB3P54753 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
EPHB3P54753 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.77■□□□□ 0.75
EPHB3P54753 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.76■□□□□ 0.75
EPHB3P54753 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.76■□□□□ 0.75
EPHB3P54753 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.76■□□□□ 0.75
EPHB3P54753 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.76■□□□□ 0.75
EPHB3P54753 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.76■□□□□ 0.75
EPHB3P54753 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
EPHB3P54753 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.76■□□□□ 0.75
EPHB3P54753 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.76■□□□□ 0.75
EPHB3P54753 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
EPHB3P54753 AC069148.1-201ENST00000608741 768 ntBASIC19.76■□□□□ 0.75
EPHB3P54753 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
EPHB3P54753 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.76■□□□□ 0.75
EPHB3P54753 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
EPHB3P54753 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.76■□□□□ 0.75
EPHB3P54753 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.76■□□□□ 0.75
EPHB3P54753 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.76■□□□□ 0.75
EPHB3P54753 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.76■□□□□ 0.75
EPHB3P54753 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB3P54753 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
EPHB3P54753 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHB3P54753 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EPHB3P54753 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHB3P54753 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHB3P54753 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.75■□□□□ 0.75
EPHB3P54753 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHB3P54753 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHB3P54753 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.75■□□□□ 0.75
EPHB3P54753 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EPHB3P54753 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHB3P54753 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EPHB3P54753 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHB3P54753 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
EPHB3P54753 KRT18P56-201ENST00000507275 550 ntBASIC19.75■□□□□ 0.75
EPHB3P54753 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.75■□□□□ 0.75
EPHB3P54753 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHB3P54753 AC112497.1-201ENST00000624824 639 ntBASIC19.75■□□□□ 0.75
EPHB3P54753 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.75■□□□□ 0.75
EPHB3P54753 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHB3P54753 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHB3P54753 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms