Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
POLR2JP52435 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR2JP52435 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
POLR2JP52435 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2JP52435 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
POLR2JP52435 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2JP52435 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR2JP52435 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.12■□□□□ 0.49
POLR2JP52435 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR2JP52435 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2JP52435 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2JP52435 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR2JP52435 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
POLR2JP52435 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2JP52435 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2JP52435 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2JP52435 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2JP52435 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.12■□□□□ 0.49
POLR2JP52435 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.12■□□□□ 0.49
POLR2JP52435 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2JP52435 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2JP52435 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
POLR2JP52435 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
POLR2JP52435 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR2JP52435 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR2JP52435 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR2JP52435 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR2JP52435 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR2JP52435 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 NCF1B-203ENST00000435988 1254 ntBASIC18.11■□□□□ 0.49
POLR2JP52435 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.11■□□□□ 0.49
POLR2JP52435 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.11■□□□□ 0.49
POLR2JP52435 AL160286.2-201ENST00000567150 934 ntBASIC18.11■□□□□ 0.49
POLR2JP52435 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.11■□□□□ 0.49
POLR2JP52435 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.11■□□□□ 0.49
POLR2JP52435 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR2JP52435 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.11■□□□□ 0.49
POLR2JP52435 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 AC073592.3-201ENST00000625118 1834 ntBASIC18.11■□□□□ 0.49
POLR2JP52435 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 NOC2LP2-201ENST00000407594 1944 ntBASIC18.11■□□□□ 0.49
POLR2JP52435 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
POLR2JP52435 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
POLR2JP52435 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
POLR2JP52435 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2JP52435 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
POLR2JP52435 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.1■□□□□ 0.49
POLR2JP52435 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.1■□□□□ 0.49
POLR2JP52435 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 ABALON-201ENST00000629058 1903 ntBASIC18.1■□□□□ 0.49
POLR2JP52435 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR2JP52435 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR2JP52435 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.1■□□□□ 0.49
POLR2JP52435 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
POLR2JP52435 TSPY23P-201ENST00000440136 739 ntBASIC18.1■□□□□ 0.49
POLR2JP52435 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR2JP52435 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.1■□□□□ 0.49
POLR2JP52435 AC083880.1-201ENST00000608266 535 ntBASIC18.1■□□□□ 0.49
POLR2JP52435 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR2JP52435 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2JP52435 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
POLR2JP52435 AC126763.1-201ENST00000552015 2118 ntBASIC18.1■□□□□ 0.49
POLR2JP52435 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR2JP52435 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2JP52435 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.09■□□□□ 0.49
POLR2JP52435 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms