Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
BRCA2P51587 AC009065.1-201ENST00000564055 1225 ntBASIC21.19■□□□□ 0.98
BRCA2P51587 TERC-201ENST00000602385 541 ntBASIC21.19■□□□□ 0.98
BRCA2P51587 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.19■□□□□ 0.98
BRCA2P51587 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.18■□□□□ 0.98
BRCA2P51587 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BRCA2P51587 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.18■□□□□ 0.98
BRCA2P51587 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.18■□□□□ 0.98
BRCA2P51587 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRCA2P51587 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRCA2P51587 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.18■□□□□ 0.98
BRCA2P51587 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.18■□□□□ 0.98
BRCA2P51587 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.18■□□□□ 0.98
BRCA2P51587 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.18■□□□□ 0.98
BRCA2P51587 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.18■□□□□ 0.98
BRCA2P51587 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRCA2P51587 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.18■□□□□ 0.98
BRCA2P51587 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.18■□□□□ 0.98
BRCA2P51587 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.18■□□□□ 0.98
BRCA2P51587 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRCA2P51587 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.18■□□□□ 0.98
BRCA2P51587 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRCA2P51587 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRCA2P51587 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRCA2P51587 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRCA2P51587 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRCA2P51587 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.17■□□□□ 0.98
BRCA2P51587 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.17■□□□□ 0.98
BRCA2P51587 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.17■□□□□ 0.98
BRCA2P51587 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRCA2P51587 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
BRCA2P51587 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
BRCA2P51587 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRCA2P51587 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
BRCA2P51587 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.17■□□□□ 0.98
BRCA2P51587 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.17■□□□□ 0.98
BRCA2P51587 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRCA2P51587 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.17■□□□□ 0.98
BRCA2P51587 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.16■□□□□ 0.98
BRCA2P51587 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRCA2P51587 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.16■□□□□ 0.98
BRCA2P51587 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.16■□□□□ 0.98
BRCA2P51587 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
BRCA2P51587 AL049840.3-201ENST00000602669 611 ntBASIC21.16■□□□□ 0.98
BRCA2P51587 AL136038.4-201ENST00000603606 1261 ntBASIC21.16■□□□□ 0.98
BRCA2P51587 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
BRCA2P51587 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRCA2P51587 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
BRCA2P51587 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
BRCA2P51587 FAM197Y8-203ENST00000450145 560 ntBASIC21.16■□□□□ 0.98
BRCA2P51587 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRCA2P51587 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRCA2P51587 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.16■□□□□ 0.98
BRCA2P51587 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.16■□□□□ 0.98
BRCA2P51587 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
BRCA2P51587 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRCA2P51587 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.16■□□□□ 0.98
BRCA2P51587 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRCA2P51587 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.16■□□□□ 0.98
BRCA2P51587 MIR3917-201ENST00000580971 93 ntBASIC21.16■□□□□ 0.98
BRCA2P51587 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRCA2P51587 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BRCA2P51587 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.15■□□□□ 0.98
BRCA2P51587 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCA2P51587 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.15■□□□□ 0.98
BRCA2P51587 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.15■□□□□ 0.98
BRCA2P51587 MIR3197-201ENST00000582241 73 ntBASIC21.15■□□□□ 0.98
BRCA2P51587 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCA2P51587 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BRCA2P51587 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCA2P51587 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
BRCA2P51587 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
BRCA2P51587 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCA2P51587 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
BRCA2P51587 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BRCA2P51587 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCA2P51587 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCA2P51587 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BRCA2P51587 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.15■□□□□ 0.98
BRCA2P51587 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.14■□□□□ 0.98
BRCA2P51587 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BRCA2P51587 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.14■□□□□ 0.98
BRCA2P51587 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
BRCA2P51587 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
BRCA2P51587 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.14■□□□□ 0.98
BRCA2P51587 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BRCA2P51587 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.14■□□□□ 0.98
BRCA2P51587 NSUN5P1-202ENST00000421140 1535 ntBASIC21.14■□□□□ 0.98
BRCA2P51587 NSUN5P2-203ENST00000457352 1529 ntBASIC21.14■□□□□ 0.98
BRCA2P51587 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
BRCA2P51587 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.14■□□□□ 0.97
BRCA2P51587 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRCA2P51587 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.14■□□□□ 0.97
BRCA2P51587 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.14■□□□□ 0.97
BRCA2P51587 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.14■□□□□ 0.97
BRCA2P51587 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRCA2P51587 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
BRCA2P51587 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BRCA2P51587 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
BRCA2P51587 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms