Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC1A1P43005 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.77
SLC1A1P43005 AC004980.1-204ENST00000429707 299 ntBASIC19.83■□□□□ 0.77
SLC1A1P43005 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.83■□□□□ 0.77
SLC1A1P43005 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC1A1P43005 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.83■□□□□ 0.77
SLC1A1P43005 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC1A1P43005 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC1A1P43005 KRT8P11-201ENST00000409686 1436 ntBASIC19.83■□□□□ 0.76
SLC1A1P43005 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC1A1P43005 AC135050.7-201ENST00000624508 2218 ntBASIC19.83■□□□□ 0.76
SLC1A1P43005 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SLC1A1P43005 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A1P43005 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A1P43005 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A1P43005 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A1P43005 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC1A1P43005 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC1A1P43005 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC1A1P43005 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A1P43005 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC1A1P43005 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC1A1P43005 AC073648.6-201ENST00000641589 218 ntBASIC19.82■□□□□ 0.76
SLC1A1P43005 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A1P43005 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A1P43005 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC1A1P43005 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC1A1P43005 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A1P43005 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A1P43005 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SLC1A1P43005 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC1A1P43005 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC1A1P43005 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SLC1A1P43005 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SLC1A1P43005 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC1A1P43005 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC1A1P43005 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SLC1A1P43005 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SLC1A1P43005 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SLC1A1P43005 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SLC1A1P43005 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC1A1P43005 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC1A1P43005 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC1A1P43005 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SLC1A1P43005 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC1A1P43005 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.8■□□□□ 0.76
SLC1A1P43005 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC1A1P43005 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC1A1P43005 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC1A1P43005 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SLC1A1P43005 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC1A1P43005 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.8■□□□□ 0.76
SLC1A1P43005 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SLC1A1P43005 KSR1P1-201ENST00000446298 240 ntBASIC19.8■□□□□ 0.76
SLC1A1P43005 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SLC1A1P43005 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC1A1P43005 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SLC1A1P43005 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.8■□□□□ 0.76
SLC1A1P43005 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC1A1P43005 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A1P43005 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC1A1P43005 HTR7P1-201ENST00000538670 1336 ntBASIC19.79■□□□□ 0.76
SLC1A1P43005 BICD1-207ENST00000551848 1962 ntBASIC19.79■□□□□ 0.76
SLC1A1P43005 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A1P43005 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A1P43005 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
SLC1A1P43005 AC073592.3-201ENST00000625118 1834 ntBASIC19.79■□□□□ 0.76
SLC1A1P43005 KRT8P3-201ENST00000519669 1449 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms