Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC28.35■■■□□ 2.13
KDM5CP41229 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC28.35■■■□□ 2.13
KDM5CP41229 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC28.35■■■□□ 2.13
KDM5CP41229 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC28.35■■■□□ 2.13
KDM5CP41229 IL9RP2-201ENST00000423948 1312 ntBASIC28.35■■■□□ 2.13
KDM5CP41229 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
KDM5CP41229 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
KDM5CP41229 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
KDM5CP41229 AL512408.1-201ENST00000569378 2000 ntBASIC28.34■■■□□ 2.13
KDM5CP41229 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
KDM5CP41229 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
KDM5CP41229 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC28.34■■■□□ 2.13
KDM5CP41229 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC28.34■■■□□ 2.13
KDM5CP41229 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
KDM5CP41229 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
KDM5CP41229 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
KDM5CP41229 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
KDM5CP41229 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC28.34■■■□□ 2.13
KDM5CP41229 MIR7706-201ENST00000613747 67 ntBASIC28.34■■■□□ 2.13
KDM5CP41229 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
KDM5CP41229 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
KDM5CP41229 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
KDM5CP41229 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
KDM5CP41229 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC28.33■■■□□ 2.13
KDM5CP41229 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
KDM5CP41229 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
KDM5CP41229 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
KDM5CP41229 Z69720.1-201ENST00000601483 472 ntBASIC28.33■■■□□ 2.13
KDM5CP41229 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC28.33■■■□□ 2.13
KDM5CP41229 AC117500.6-201ENST00000624871 588 ntBASIC28.33■■■□□ 2.13
KDM5CP41229 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
KDM5CP41229 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
KDM5CP41229 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC28.33■■■□□ 2.13
KDM5CP41229 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
KDM5CP41229 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC28.33■■■□□ 2.13
KDM5CP41229 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
KDM5CP41229 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC28.33■■■□□ 2.13
KDM5CP41229 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC28.33■■■□□ 2.13
KDM5CP41229 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC28.33■■■□□ 2.13
KDM5CP41229 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
KDM5CP41229 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
KDM5CP41229 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC28.33■■■□□ 2.13
KDM5CP41229 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
KDM5CP41229 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
KDM5CP41229 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC28.33■■■□□ 2.12
KDM5CP41229 KRT18P13-201ENST00000400056 1290 ntBASIC28.33■■■□□ 2.12
KDM5CP41229 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.12
KDM5CP41229 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.12
KDM5CP41229 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.12
KDM5CP41229 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC28.33■■■□□ 2.12
KDM5CP41229 AL162377.1-201ENST00000618844 1793 ntBASIC28.32■■■□□ 2.12
KDM5CP41229 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
KDM5CP41229 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
KDM5CP41229 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC28.32■■■□□ 2.12
KDM5CP41229 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
KDM5CP41229 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
KDM5CP41229 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
KDM5CP41229 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
KDM5CP41229 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC28.32■■■□□ 2.12
KDM5CP41229 AL590627.1-203ENST00000421194 1026 ntBASIC28.32■■■□□ 2.12
KDM5CP41229 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
KDM5CP41229 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC28.32■■■□□ 2.12
KDM5CP41229 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC28.32■■■□□ 2.12
KDM5CP41229 AF238378.1-201ENST00000526806 358 ntBASIC28.32■■■□□ 2.12
KDM5CP41229 AP001005.1-201ENST00000571755 1248 ntBASIC28.32■■■□□ 2.12
KDM5CP41229 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
KDM5CP41229 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC28.32■■■□□ 2.12
KDM5CP41229 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
KDM5CP41229 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
KDM5CP41229 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
KDM5CP41229 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
KDM5CP41229 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
KDM5CP41229 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
KDM5CP41229 KRT18P23-201ENST00000435622 1283 ntBASIC28.31■■■□□ 2.12
KDM5CP41229 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
KDM5CP41229 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
KDM5CP41229 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC28.31■■■□□ 2.12
KDM5CP41229 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC28.31■■■□□ 2.12
KDM5CP41229 AL773604.1-201ENST00000617417 272 ntBASIC28.31■■■□□ 2.12
KDM5CP41229 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
KDM5CP41229 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
KDM5CP41229 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC28.31■■■□□ 2.12
KDM5CP41229 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC28.31■■■□□ 2.12
KDM5CP41229 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
KDM5CP41229 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC28.31■■■□□ 2.12
KDM5CP41229 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
KDM5CP41229 NSUN5P1-202ENST00000421140 1535 ntBASIC28.3■■■□□ 2.12
KDM5CP41229 NSUN5P2-203ENST00000457352 1529 ntBASIC28.3■■■□□ 2.12
KDM5CP41229 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
KDM5CP41229 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
KDM5CP41229 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
KDM5CP41229 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
KDM5CP41229 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC28.3■■■□□ 2.12
KDM5CP41229 TPM1-218ENST00000559281 851 ntTSL 5 BASIC28.3■■■□□ 2.12
KDM5CP41229 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC28.3■■■□□ 2.12
KDM5CP41229 LINC01711-201ENST00000598340 967 ntBASIC28.3■■■□□ 2.12
KDM5CP41229 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC28.3■■■□□ 2.12
KDM5CP41229 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
KDM5CP41229 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
KDM5CP41229 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms