Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA3P32297 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA3P32297 HTR7P1-201ENST00000538670 1336 ntBASIC19.97■□□□□ 0.79
CHRNA3P32297 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.97■□□□□ 0.79
CHRNA3P32297 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRNA3P32297 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHRNA3P32297 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.96■□□□□ 0.79
CHRNA3P32297 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHRNA3P32297 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHRNA3P32297 KRT8P8-201ENST00000434750 1448 ntBASIC19.96■□□□□ 0.79
CHRNA3P32297 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.96■□□□□ 0.79
CHRNA3P32297 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.96■□□□□ 0.79
CHRNA3P32297 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHRNA3P32297 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
CHRNA3P32297 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHRNA3P32297 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHRNA3P32297 AP006587.1-201ENST00000534129 1502 ntBASIC19.96■□□□□ 0.79
CHRNA3P32297 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CHRNA3P32297 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA3P32297 AL390961.4-201ENST00000623958 2535 ntBASIC19.96■□□□□ 0.79
CHRNA3P32297 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CHRNA3P32297 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA3P32297 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.95■□□□□ 0.78
CHRNA3P32297 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.95■□□□□ 0.78
CHRNA3P32297 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA3P32297 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA3P32297 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHRNA3P32297 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA3P32297 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA3P32297 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA3P32297 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.95■□□□□ 0.78
CHRNA3P32297 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.95■□□□□ 0.78
CHRNA3P32297 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.95■□□□□ 0.78
CHRNA3P32297 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.95■□□□□ 0.78
CHRNA3P32297 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.95■□□□□ 0.78
CHRNA3P32297 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA3P32297 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHRNA3P32297 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRNA3P32297 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.95■□□□□ 0.78
CHRNA3P32297 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRNA3P32297 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRNA3P32297 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA3P32297 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.94■□□□□ 0.78
CHRNA3P32297 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA3P32297 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA3P32297 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.94■□□□□ 0.78
CHRNA3P32297 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA3P32297 YBX1P10-201ENST00000444752 975 ntBASIC19.94■□□□□ 0.78
CHRNA3P32297 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.94■□□□□ 0.78
CHRNA3P32297 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHRNA3P32297 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.94■□□□□ 0.78
CHRNA3P32297 AC113410.3-201ENST00000623366 203 ntBASIC19.94■□□□□ 0.78
CHRNA3P32297 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.94■□□□□ 0.78
CHRNA3P32297 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.94■□□□□ 0.78
CHRNA3P32297 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA3P32297 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA3P32297 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHRNA3P32297 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHRNA3P32297 AC020763.4-201ENST00000623414 4170 ntBASIC19.93■□□□□ 0.78
CHRNA3P32297 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA3P32297 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CHRNA3P32297 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRNA3P32297 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHRNA3P32297 TSPY7P-201ENST00000431358 1114 ntBASIC19.93■□□□□ 0.78
CHRNA3P32297 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA3P32297 AF186192.3-201ENST00000583427 947 ntBASIC19.93■□□□□ 0.78
CHRNA3P32297 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.93■□□□□ 0.78
CHRNA3P32297 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms