Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL1P22362 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCL1P22362 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL1P22362 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCL1P22362 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL1P22362 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.3■□□□□ 0.2
CCL1P22362 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCL1P22362 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL1P22362 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCL1P22362 KSR1P1-201ENST00000446298 240 ntBASIC16.3■□□□□ 0.2
CCL1P22362 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.3■□□□□ 0.2
CCL1P22362 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 AC026271.3-201ENST00000571884 352 ntBASIC16.3■□□□□ 0.2
CCL1P22362 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCL1P22362 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCL1P22362 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL1P22362 AC073648.6-201ENST00000641589 218 ntBASIC16.3■□□□□ 0.2
CCL1P22362 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL1P22362 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL1P22362 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL1P22362 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCL1P22362 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CCL1P22362 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
CCL1P22362 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL1P22362 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CCL1P22362 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL1P22362 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL1P22362 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCL1P22362 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CCL1P22362 HTR7P1-201ENST00000538670 1336 ntBASIC16.29■□□□□ 0.2
CCL1P22362 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL1P22362 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CCL1P22362 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CCL1P22362 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL1P22362 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.29■□□□□ 0.2
CCL1P22362 AL353807.1-201ENST00000427475 662 ntBASIC16.29■□□□□ 0.2
CCL1P22362 AC091390.4-202ENST00000476426 537 ntBASIC16.29■□□□□ 0.2
CCL1P22362 AP002982.1-201ENST00000492365 877 ntBASIC16.29■□□□□ 0.2
CCL1P22362 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL1P22362 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCL1P22362 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.29■□□□□ 0.2
CCL1P22362 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL1P22362 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
CCL1P22362 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL1P22362 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 AL162741.1-201ENST00000565563 1558 ntBASIC16.29■□□□□ 0.2
CCL1P22362 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL1P22362 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL1P22362 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL1P22362 AC126763.1-201ENST00000552015 2118 ntBASIC16.28■□□□□ 0.2
CCL1P22362 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.28■□□□□ 0.2
CCL1P22362 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.28■□□□□ 0.2
CCL1P22362 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCL1P22362 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL1P22362 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL1P22362 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCL1P22362 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL1P22362 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms