Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AC126763.1-201ENST00000552015 2118 ntBASIC16.6■□□□□ 0.25
RAB3BP20337 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3BP20337 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.59■□□□□ 0.25
RAB3BP20337 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAB3BP20337 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAB3BP20337 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB3BP20337 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB3BP20337 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB3BP20337 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB3BP20337 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 AC010980.2-201ENST00000587099 1412 ntBASIC16.59■□□□□ 0.25
RAB3BP20337 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.59■□□□□ 0.25
RAB3BP20337 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3BP20337 KRT17P1-201ENST00000399211 1546 ntBASIC16.59■□□□□ 0.25
RAB3BP20337 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB3BP20337 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3BP20337 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RAB3BP20337 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3BP20337 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3BP20337 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
RAB3BP20337 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3BP20337 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3BP20337 AC008764.6-201ENST00000595909 2069 ntBASIC16.58■□□□□ 0.25
RAB3BP20337 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3BP20337 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.58■□□□□ 0.25
RAB3BP20337 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.25
RAB3BP20337 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB3BP20337 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAB3BP20337 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
RAB3BP20337 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3BP20337 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3BP20337 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3BP20337 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.58■□□□□ 0.24
RAB3BP20337 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3BP20337 DUX4L16-201ENST00000555130 1264 ntBASIC16.58■□□□□ 0.24
RAB3BP20337 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3BP20337 NTF6G-201ENST00000591094 616 ntBASIC16.58■□□□□ 0.24
RAB3BP20337 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAB3BP20337 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3BP20337 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB3BP20337 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3BP20337 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3BP20337 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB3BP20337 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3BP20337 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3BP20337 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3BP20337 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3BP20337 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3BP20337 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3BP20337 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB3BP20337 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB3BP20337 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3BP20337 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3BP20337 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
RAB3BP20337 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB3BP20337 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3BP20337 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3BP20337 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB3BP20337 GPX1P1-201ENST00000388829 606 ntBASIC16.57■□□□□ 0.24
RAB3BP20337 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3BP20337 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3BP20337 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB3BP20337 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB3BP20337 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB3BP20337 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3BP20337 BID-214ENST00000617586 542 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3BP20337 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB3BP20337 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3BP20337 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB3BP20337 PKD1P1-201ENST00000458669 6805 ntBASIC16.57■□□□□ 0.24
RAB3BP20337 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB3BP20337 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RAB3BP20337 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB3BP20337 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms