Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
XRCC1P18887 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC1P18887 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
XRCC1P18887 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC1P18887 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC1P18887 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.88■□□□□ 0.61
XRCC1P18887 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC1P18887 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
XRCC1P18887 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRCC1P18887 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.87■□□□□ 0.61
XRCC1P18887 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
XRCC1P18887 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
XRCC1P18887 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.87■□□□□ 0.61
XRCC1P18887 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
XRCC1P18887 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.87■□□□□ 0.61
XRCC1P18887 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.87■□□□□ 0.61
XRCC1P18887 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.87■□□□□ 0.61
XRCC1P18887 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
XRCC1P18887 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.87■□□□□ 0.61
XRCC1P18887 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.87■□□□□ 0.61
XRCC1P18887 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.87■□□□□ 0.61
XRCC1P18887 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.87■□□□□ 0.61
XRCC1P18887 AC012306.2-201ENST00000609350 630 ntBASIC18.87■□□□□ 0.61
XRCC1P18887 AC097493.4-201ENST00000641197 219 ntBASIC18.87■□□□□ 0.61
XRCC1P18887 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.87■□□□□ 0.61
XRCC1P18887 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
XRCC1P18887 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.86■□□□□ 0.61
XRCC1P18887 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
XRCC1P18887 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.86■□□□□ 0.61
XRCC1P18887 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.86■□□□□ 0.61
XRCC1P18887 RCC2P6-201ENST00000526625 1557 ntBASIC18.86■□□□□ 0.61
XRCC1P18887 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 MIR1238-201ENST00000408483 83 ntBASIC18.86■□□□□ 0.61
XRCC1P18887 AC004951.3-201ENST00000418645 1148 ntBASIC18.86■□□□□ 0.61
XRCC1P18887 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.86■□□□□ 0.61
XRCC1P18887 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.86■□□□□ 0.61
XRCC1P18887 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.86■□□□□ 0.61
XRCC1P18887 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.86■□□□□ 0.61
XRCC1P18887 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
XRCC1P18887 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.86■□□□□ 0.61
XRCC1P18887 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.86■□□□□ 0.61
XRCC1P18887 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
XRCC1P18887 AC104581.1-202ENST00000635932 2618 ntBASIC18.86■□□□□ 0.61
XRCC1P18887 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
XRCC1P18887 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
XRCC1P18887 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
XRCC1P18887 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.85■□□□□ 0.61
XRCC1P18887 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
XRCC1P18887 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.85■□□□□ 0.61
XRCC1P18887 Z85996.1-201ENST00000494644 937 ntBASIC18.85■□□□□ 0.61
XRCC1P18887 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.85■□□□□ 0.61
XRCC1P18887 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
XRCC1P18887 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.85■□□□□ 0.61
XRCC1P18887 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.85■□□□□ 0.61
XRCC1P18887 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.85■□□□□ 0.61
XRCC1P18887 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.85■□□□□ 0.61
XRCC1P18887 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
XRCC1P18887 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.85■□□□□ 0.61
XRCC1P18887 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.85■□□□□ 0.61
XRCC1P18887 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms