Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN1P18031 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN1P18031 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN1P18031 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN1P18031 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN1P18031 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN1P18031 AL161938.1-201ENST00000569833 2180 ntBASIC20.03■□□□□ 0.8
PTPN1P18031 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN1P18031 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN1P18031 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN1P18031 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN1P18031 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.03■□□□□ 0.8
PTPN1P18031 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
PTPN1P18031 AC141257.4-201ENST00000634557 245 ntBASIC20.03■□□□□ 0.8
PTPN1P18031 AC136944.6-201ENST00000634818 245 ntBASIC20.03■□□□□ 0.8
PTPN1P18031 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN1P18031 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN1P18031 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PTPN1P18031 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.03■□□□□ 0.8
PTPN1P18031 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PTPN1P18031 AL512353.2-201ENST00000448759 1962 ntBASIC20.03■□□□□ 0.8
PTPN1P18031 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN1P18031 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN1P18031 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PTPN1P18031 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PTPN1P18031 AIRN-201ENST00000601203 4374 ntBASIC20.02■□□□□ 0.8
PTPN1P18031 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
PTPN1P18031 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN1P18031 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
PTPN1P18031 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN1P18031 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN1P18031 BX664615.1-201ENST00000443558 458 ntBASIC20.02■□□□□ 0.8
PTPN1P18031 AC104076.2-201ENST00000448912 469 ntBASIC20.02■□□□□ 0.8
PTPN1P18031 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PTPN1P18031 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN1P18031 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.02■□□□□ 0.8
PTPN1P18031 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN1P18031 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN1P18031 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN1P18031 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN1P18031 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN1P18031 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN1P18031 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN1P18031 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PTPN1P18031 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN1P18031 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN1P18031 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN1P18031 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.02■□□□□ 0.79
PTPN1P18031 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
PTPN1P18031 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN1P18031 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN1P18031 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN1P18031 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN1P18031 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN1P18031 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN1P18031 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN1P18031 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN1P18031 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN1P18031 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN1P18031 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PTPN1P18031 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN1P18031 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.01■□□□□ 0.79
PTPN1P18031 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN1P18031 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN1P18031 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN1P18031 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN1P18031 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN1P18031 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN1P18031 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PTPN1P18031 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PTPN1P18031 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PTPN1P18031 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PTPN1P18031 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20■□□□□ 0.79
PTPN1P18031 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20■□□□□ 0.79
PTPN1P18031 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PTPN1P18031 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20■□□□□ 0.79
PTPN1P18031 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20■□□□□ 0.79
PTPN1P18031 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20■□□□□ 0.79
PTPN1P18031 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20■□□□□ 0.79
PTPN1P18031 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20■□□□□ 0.79
PTPN1P18031 CR769767.2-201ENST00000622735 460 ntBASIC20■□□□□ 0.79
PTPN1P18031 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20■□□□□ 0.79
PTPN1P18031 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PTPN1P18031 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN1P18031 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms