Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
ATP2A2P16615 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A2P16615 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2A2P16615 FDX1P1-201ENST00000449115 551 ntBASIC20.88■□□□□ 0.93
ATP2A2P16615 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2A2P16615 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2A2P16615 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.88■□□□□ 0.93
ATP2A2P16615 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.88■□□□□ 0.93
ATP2A2P16615 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2A2P16615 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A2P16615 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.88■□□□□ 0.93
ATP2A2P16615 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A2P16615 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.88■□□□□ 0.93
ATP2A2P16615 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A2P16615 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A2P16615 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A2P16615 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A2P16615 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
ATP2A2P16615 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP2A2P16615 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.87■□□□□ 0.93
ATP2A2P16615 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ATP2A2P16615 LINC01465-201ENST00000408887 1940 ntBASIC20.87■□□□□ 0.93
ATP2A2P16615 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 SPDYE15P-201ENST00000424157 909 ntBASIC20.87■□□□□ 0.93
ATP2A2P16615 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2A2P16615 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ATP2A2P16615 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
ATP2A2P16615 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.87■□□□□ 0.93
ATP2A2P16615 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.87■□□□□ 0.93
ATP2A2P16615 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ATP2A2P16615 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
ATP2A2P16615 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
ATP2A2P16615 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP2A2P16615 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2A2P16615 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP2A2P16615 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2A2P16615 AL162377.1-201ENST00000618844 1793 ntBASIC20.87■□□□□ 0.93
ATP2A2P16615 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.87■□□□□ 0.93
ATP2A2P16615 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ATP2A2P16615 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A2P16615 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A2P16615 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2A2P16615 PCDHAC2-203ENST00000615316 3011 ntBASIC20.86■□□□□ 0.93
ATP2A2P16615 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A2P16615 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A2P16615 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A2P16615 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ATP2A2P16615 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2A2P16615 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A2P16615 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
ATP2A2P16615 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2A2P16615 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.86■□□□□ 0.93
ATP2A2P16615 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A2P16615 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A2P16615 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
ATP2A2P16615 AC092329.2-201ENST00000598402 547 ntBASIC20.86■□□□□ 0.93
ATP2A2P16615 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.86■□□□□ 0.93
ATP2A2P16615 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A2P16615 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2A2P16615 AL512408.1-201ENST00000569378 2000 ntBASIC20.86■□□□□ 0.93
ATP2A2P16615 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A2P16615 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
ATP2A2P16615 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ATP2A2P16615 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2A2P16615 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
ATP2A2P16615 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A2P16615 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A2P16615 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ATP2A2P16615 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.85■□□□□ 0.93
ATP2A2P16615 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ATP2A2P16615 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 KRT8P41-201ENST00000533985 1514 ntBASIC20.85■□□□□ 0.93
ATP2A2P16615 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ATP2A2P16615 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A2P16615 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 AC004870.1-201ENST00000315132 882 ntBASIC20.85■□□□□ 0.93
ATP2A2P16615 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 AL845331.1-201ENST00000424978 1190 ntBASIC20.85■□□□□ 0.93
ATP2A2P16615 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms