Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCL4P13236 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.87■□□□□ 0.45
CCL4P13236 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.87■□□□□ 0.45
CCL4P13236 MIR3652-201ENST00000579335 131 ntBASIC17.87■□□□□ 0.45
CCL4P13236 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.87■□□□□ 0.45
CCL4P13236 AL121672.3-201ENST00000608644 468 ntBASIC17.87■□□□□ 0.45
CCL4P13236 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.87■□□□□ 0.45
CCL4P13236 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.87■□□□□ 0.45
CCL4P13236 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.87■□□□□ 0.45
CCL4P13236 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.87■□□□□ 0.45
CCL4P13236 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.87■□□□□ 0.45
CCL4P13236 AL162741.1-201ENST00000565563 1558 ntBASIC17.87■□□□□ 0.45
CCL4P13236 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.86■□□□□ 0.45
CCL4P13236 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCL4P13236 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCL4P13236 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 AP002383.4-201ENST00000442518 975 ntBASIC17.86■□□□□ 0.45
CCL4P13236 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.86■□□□□ 0.45
CCL4P13236 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CCL4P13236 MIR3180-1-201ENST00000580374 94 ntBASIC17.86■□□□□ 0.45
CCL4P13236 MIR3180-3-201ENST00000584616 94 ntBASIC17.86■□□□□ 0.45
CCL4P13236 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.86■□□□□ 0.45
CCL4P13236 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.86■□□□□ 0.45
CCL4P13236 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCL4P13236 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCL4P13236 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL4P13236 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.86■□□□□ 0.45
CCL4P13236 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCL4P13236 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCL4P13236 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCL4P13236 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.85■□□□□ 0.45
CCL4P13236 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCL4P13236 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.85■□□□□ 0.45
CCL4P13236 PRELID1P1-202ENST00000567272 903 ntBASIC17.85■□□□□ 0.45
CCL4P13236 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 MIR3917-201ENST00000580971 93 ntBASIC17.85■□□□□ 0.45
CCL4P13236 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
CCL4P13236 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.85■□□□□ 0.45
CCL4P13236 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 TREX1-205ENST00000625293 1783 ntBASIC17.85■□□□□ 0.45
CCL4P13236 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCL4P13236 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
CCL4P13236 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 TEX21P-204ENST00000641479 1693 ntBASIC17.84■□□□□ 0.45
CCL4P13236 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL4P13236 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL4P13236 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCL4P13236 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
CCL4P13236 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL4P13236 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.84■□□□□ 0.45
CCL4P13236 HLA-F-220ENST00000434407 884 ntBASIC17.84■□□□□ 0.45
CCL4P13236 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
CCL4P13236 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL4P13236 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL4P13236 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL4P13236 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.84■□□□□ 0.45
CCL4P13236 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
CCL4P13236 AL136038.4-201ENST00000603606 1261 ntBASIC17.84■□□□□ 0.45
CCL4P13236 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.84■□□□□ 0.45
CCL4P13236 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.84■□□□□ 0.45
CCL4P13236 AL391807.1-203ENST00000604392 2365 ntBASIC17.84■□□□□ 0.45
CCL4P13236 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCL4P13236 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms