Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.51■□□□□ 0.39
UBL4AP11441 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
UBL4AP11441 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
UBL4AP11441 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBL4AP11441 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBL4AP11441 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBL4AP11441 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.5■□□□□ 0.39
UBL4AP11441 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.5■□□□□ 0.39
UBL4AP11441 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.5■□□□□ 0.39
UBL4AP11441 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
UBL4AP11441 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.5■□□□□ 0.39
UBL4AP11441 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBL4AP11441 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.5■□□□□ 0.39
UBL4AP11441 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
UBL4AP11441 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBL4AP11441 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBL4AP11441 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
UBL4AP11441 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.5■□□□□ 0.39
UBL4AP11441 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.5■□□□□ 0.39
UBL4AP11441 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.5■□□□□ 0.39
UBL4AP11441 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
UBL4AP11441 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBL4AP11441 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.5■□□□□ 0.39
UBL4AP11441 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBL4AP11441 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.5■□□□□ 0.39
UBL4AP11441 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBL4AP11441 AL049812.1-201ENST00000432563 2267 ntBASIC17.5■□□□□ 0.39
UBL4AP11441 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.5■□□□□ 0.39
UBL4AP11441 FEM1AP3-201ENST00000403722 1741 ntBASIC17.5■□□□□ 0.39
UBL4AP11441 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBL4AP11441 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
UBL4AP11441 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.49■□□□□ 0.39
UBL4AP11441 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.49■□□□□ 0.39
UBL4AP11441 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.49■□□□□ 0.39
UBL4AP11441 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 AC104581.1-202ENST00000635932 2618 ntBASIC17.49■□□□□ 0.39
UBL4AP11441 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.49■□□□□ 0.39
UBL4AP11441 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.49■□□□□ 0.39
UBL4AP11441 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.49■□□□□ 0.39
UBL4AP11441 AC012618.2-201ENST00000428058 849 ntBASIC17.49■□□□□ 0.39
UBL4AP11441 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.49■□□□□ 0.39
UBL4AP11441 AP001412.1-201ENST00000608405 714 ntBASIC17.49■□□□□ 0.39
UBL4AP11441 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
UBL4AP11441 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.49■□□□□ 0.39
UBL4AP11441 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 RCC2P6-201ENST00000526625 1557 ntBASIC17.49■□□□□ 0.39
UBL4AP11441 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBL4AP11441 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
UBL4AP11441 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
UBL4AP11441 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
UBL4AP11441 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.48■□□□□ 0.39
UBL4AP11441 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
UBL4AP11441 RPS2P55-201ENST00000397318 883 ntBASIC17.48■□□□□ 0.39
UBL4AP11441 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.48■□□□□ 0.39
UBL4AP11441 AC004951.3-201ENST00000418645 1148 ntBASIC17.48■□□□□ 0.39
UBL4AP11441 FAM197Y1-201ENST00000421178 764 ntBASIC17.48■□□□□ 0.39
UBL4AP11441 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.48■□□□□ 0.39
UBL4AP11441 AC107956.1-201ENST00000494359 873 ntBASIC17.48■□□□□ 0.39
UBL4AP11441 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.48■□□□□ 0.39
UBL4AP11441 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.48■□□□□ 0.39
UBL4AP11441 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.48■□□□□ 0.39
UBL4AP11441 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.48■□□□□ 0.39
UBL4AP11441 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.48■□□□□ 0.39
UBL4AP11441 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
UBL4AP11441 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.48■□□□□ 0.39
UBL4AP11441 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 CD177P1-201ENST00000606252 935 ntBASIC17.48■□□□□ 0.39
UBL4AP11441 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.48■□□□□ 0.39
UBL4AP11441 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBL4AP11441 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.48■□□□□ 0.39
UBL4AP11441 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.48■□□□□ 0.39
UBL4AP11441 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
UBL4AP11441 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBL4AP11441 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms