Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 AC083880.1-201ENST00000608266 535 ntBASIC18.28■□□□□ 0.52
LINGO3P0C6S8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 KRT16P6-202ENST00000425692 1426 ntBASIC18.28■□□□□ 0.52
LINGO3P0C6S8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINGO3P0C6S8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 ESPNP-201ENST00000270691 2015 ntBASIC18.27■□□□□ 0.52
LINGO3P0C6S8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.27■□□□□ 0.52
LINGO3P0C6S8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINGO3P0C6S8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINGO3P0C6S8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINGO3P0C6S8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINGO3P0C6S8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 AC008764.6-201ENST00000595909 2069 ntBASIC18.26■□□□□ 0.51
LINGO3P0C6S8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.26■□□□□ 0.51
LINGO3P0C6S8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 CICP6-201ENST00000457191 2729 ntBASIC18.25■□□□□ 0.51
LINGO3P0C6S8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 AC023632.3-201ENST00000521633 145 ntBASIC18.25■□□□□ 0.51
LINGO3P0C6S8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINGO3P0C6S8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms