Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
FREM3P0C091 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.19■□□□□ 0.34
FREM3P0C091 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
FREM3P0C091 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.19■□□□□ 0.34
FREM3P0C091 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.19■□□□□ 0.34
FREM3P0C091 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
FREM3P0C091 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
FREM3P0C091 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
FREM3P0C091 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
FREM3P0C091 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FREM3P0C091 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
FREM3P0C091 AC093503.3-201ENST00000624917 2352 ntBASIC17.18■□□□□ 0.34
FREM3P0C091 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 AC117947.1-201ENST00000427448 529 ntBASIC17.18■□□□□ 0.34
FREM3P0C091 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.18■□□□□ 0.34
FREM3P0C091 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.18■□□□□ 0.34
FREM3P0C091 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 AC018445.3-201ENST00000624177 1945 ntBASIC17.18■□□□□ 0.34
FREM3P0C091 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
FREM3P0C091 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
FREM3P0C091 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
FREM3P0C091 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.18■□□□□ 0.34
FREM3P0C091 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.18■□□□□ 0.34
FREM3P0C091 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FREM3P0C091 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.18■□□□□ 0.34
FREM3P0C091 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
FREM3P0C091 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
FREM3P0C091 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.17■□□□□ 0.34
FREM3P0C091 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
FREM3P0C091 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 EGLN1P1-201ENST00000531623 762 ntBASIC17.17■□□□□ 0.34
FREM3P0C091 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
FREM3P0C091 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.17■□□□□ 0.34
FREM3P0C091 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 AC104076.2-201ENST00000448912 469 ntBASIC17.17■□□□□ 0.34
FREM3P0C091 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.17■□□□□ 0.34
FREM3P0C091 AC116407.4-201ENST00000623319 1061 ntBASIC17.17■□□□□ 0.34
FREM3P0C091 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FREM3P0C091 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.17■□□□□ 0.34
FREM3P0C091 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FREM3P0C091 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
FREM3P0C091 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.16■□□□□ 0.34
FREM3P0C091 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FREM3P0C091 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.16■□□□□ 0.34
FREM3P0C091 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FREM3P0C091 AL049812.1-201ENST00000432563 2267 ntBASIC17.16■□□□□ 0.34
FREM3P0C091 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.16■□□□□ 0.34
FREM3P0C091 AC120498.9-201ENST00000339021 3867 ntBASIC17.16■□□□□ 0.34
FREM3P0C091 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
FREM3P0C091 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FREM3P0C091 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FREM3P0C091 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FREM3P0C091 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.16■□□□□ 0.34
FREM3P0C091 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
FREM3P0C091 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
FREM3P0C091 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms