Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.09■□□□□ 0.65
COL4A2P08572 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL4A2P08572 AL592071.1-201ENST00000611956 408 ntBASIC19.09■□□□□ 0.65
COL4A2P08572 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL4A2P08572 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.09■□□□□ 0.65
COL4A2P08572 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL4A2P08572 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
COL4A2P08572 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.09■□□□□ 0.65
COL4A2P08572 Z82202.1-201ENST00000623446 1880 ntBASIC19.09■□□□□ 0.65
COL4A2P08572 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.09■□□□□ 0.65
COL4A2P08572 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.09■□□□□ 0.65
COL4A2P08572 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
COL4A2P08572 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL4A2P08572 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL4A2P08572 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL4A2P08572 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL4A2P08572 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.08■□□□□ 0.65
COL4A2P08572 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.08■□□□□ 0.65
COL4A2P08572 KRT16P4-201ENST00000453883 522 ntBASIC19.08■□□□□ 0.65
COL4A2P08572 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL4A2P08572 AC120114.3-201ENST00000611923 658 ntBASIC19.08■□□□□ 0.65
COL4A2P08572 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL4A2P08572 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL4A2P08572 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.08■□□□□ 0.65
COL4A2P08572 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL4A2P08572 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL4A2P08572 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
COL4A2P08572 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
COL4A2P08572 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL4A2P08572 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.08■□□□□ 0.64
COL4A2P08572 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL4A2P08572 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL4A2P08572 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL4A2P08572 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL4A2P08572 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL4A2P08572 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL4A2P08572 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL4A2P08572 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.08■□□□□ 0.64
COL4A2P08572 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.08■□□□□ 0.64
COL4A2P08572 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.08■□□□□ 0.64
COL4A2P08572 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A2P08572 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.07■□□□□ 0.64
COL4A2P08572 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.07■□□□□ 0.64
COL4A2P08572 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.07■□□□□ 0.64
COL4A2P08572 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.07■□□□□ 0.64
COL4A2P08572 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A2P08572 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.07■□□□□ 0.64
COL4A2P08572 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A2P08572 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.07■□□□□ 0.64
COL4A2P08572 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A2P08572 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A2P08572 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A2P08572 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.07■□□□□ 0.64
COL4A2P08572 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
COL4A2P08572 RNA5SP419-201ENST00000515908 135 ntBASIC19.07■□□□□ 0.64
COL4A2P08572 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A2P08572 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.07■□□□□ 0.64
COL4A2P08572 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
COL4A2P08572 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
COL4A2P08572 AC008556.1-201ENST00000610908 2040 ntBASIC19.07■□□□□ 0.64
COL4A2P08572 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.07■□□□□ 0.64
COL4A2P08572 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A2P08572 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COL4A2P08572 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A2P08572 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
COL4A2P08572 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A2P08572 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A2P08572 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.06■□□□□ 0.64
COL4A2P08572 AP005901.3-202ENST00000581653 237 ntBASIC19.06■□□□□ 0.64
COL4A2P08572 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A2P08572 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A2P08572 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.06■□□□□ 0.64
COL4A2P08572 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A2P08572 KRT8P7-201ENST00000533003 1432 ntBASIC19.06■□□□□ 0.64
COL4A2P08572 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A2P08572 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.06■□□□□ 0.64
COL4A2P08572 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A2P08572 AL512353.2-201ENST00000448759 1962 ntBASIC19.06■□□□□ 0.64
COL4A2P08572 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A2P08572 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A2P08572 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A2P08572 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
COL4A2P08572 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A2P08572 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A2P08572 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A2P08572 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.05■□□□□ 0.64
COL4A2P08572 AC091607.1-201ENST00000490318 1060 ntBASIC19.05■□□□□ 0.64
COL4A2P08572 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A2P08572 AC099336.1-202ENST00000602961 463 ntBASIC19.05■□□□□ 0.64
COL4A2P08572 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.05■□□□□ 0.64
COL4A2P08572 HLA-A-201ENST00000376802 1334 ntBASIC19.05■□□□□ 0.64
COL4A2P08572 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A2P08572 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A2P08572 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A2P08572 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.05■□□□□ 0.64
COL4A2P08572 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A2P08572 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
COL4A2P08572 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A2P08572 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
COL4A2P08572 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms