Protein–RNA interactions for Protein: P08519

LPA, Apolipoprotein(a), humanhuman

Predictions only

Length 4,548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPAP08519 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LPAP08519 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
LPAP08519 FAM220CP-201ENST00000395253 831 ntBASIC10.43□□□□□ -0.74
LPAP08519 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC10.43□□□□□ -0.74
LPAP08519 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC10.43□□□□□ -0.74
LPAP08519 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC10.43□□□□□ -0.74
LPAP08519 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC10.43□□□□□ -0.74
LPAP08519 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
LPAP08519 RPSAP43-201ENST00000402237 625 ntBASIC10.43□□□□□ -0.74
LPAP08519 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC10.43□□□□□ -0.74
LPAP08519 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC10.43□□□□□ -0.74
LPAP08519 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC10.43□□□□□ -0.74
LPAP08519 AC099336.1-202ENST00000602961 463 ntBASIC10.43□□□□□ -0.74
LPAP08519 AL136038.4-201ENST00000603606 1261 ntBASIC10.43□□□□□ -0.74
LPAP08519 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC10.43□□□□□ -0.74
LPAP08519 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LPAP08519 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC10.43□□□□□ -0.74
LPAP08519 KRT18P67-201ENST00000432816 1264 ntBASIC10.43□□□□□ -0.74
LPAP08519 NMU-202ENST00000505262 693 ntTSL 3 BASIC10.43□□□□□ -0.74
LPAP08519 NAA38-203ENST00000575071 553 ntTSL 2 BASIC10.43□□□□□ -0.74
LPAP08519 AC092720.2-201ENST00000602388 1665 ntBASIC10.43□□□□□ -0.74
LPAP08519 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC10.43□□□□□ -0.74
LPAP08519 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC10.43□□□□□ -0.74
LPAP08519 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LPAP08519 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC10.43□□□□□ -0.74
LPAP08519 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC10.43□□□□□ -0.74
LPAP08519 AP001005.1-201ENST00000571755 1248 ntBASIC10.43□□□□□ -0.74
LPAP08519 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC10.43□□□□□ -0.74
LPAP08519 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 AC009065.1-201ENST00000564055 1225 ntBASIC10.42□□□□□ -0.74
LPAP08519 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LPAP08519 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC10.42□□□□□ -0.74
LPAP08519 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 UBC-206ENST00000538617 1303 ntTSL 5 BASIC10.42□□□□□ -0.74
LPAP08519 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC10.42□□□□□ -0.74
LPAP08519 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 AC005104.2-201ENST00000427818 678 ntBASIC10.42□□□□□ -0.74
LPAP08519 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC10.42□□□□□ -0.74
LPAP08519 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LPAP08519 AC012676.1-201ENST00000574705 1949 ntBASIC10.42□□□□□ -0.74
LPAP08519 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC10.42□□□□□ -0.74
LPAP08519 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC10.41□□□□□ -0.74
LPAP08519 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC10.41□□□□□ -0.74
LPAP08519 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LPAP08519 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LPAP08519 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LPAP08519 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LPAP08519 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LPAP08519 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LPAP08519 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LPAP08519 TREX1-205ENST00000625293 1783 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms