Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP3P08254 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP3P08254 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP3P08254 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
MMP3P08254 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP3P08254 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP3P08254 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.96■□□□□ 0.95
MMP3P08254 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP3P08254 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP3P08254 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP3P08254 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.96■□□□□ 0.95
MMP3P08254 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP3P08254 AL136038.4-201ENST00000603606 1261 ntBASIC20.96■□□□□ 0.95
MMP3P08254 AL121672.3-201ENST00000608644 468 ntBASIC20.96■□□□□ 0.95
MMP3P08254 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.96■□□□□ 0.95
MMP3P08254 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP3P08254 AL162741.1-201ENST00000565563 1558 ntBASIC20.96■□□□□ 0.95
MMP3P08254 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP3P08254 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP3P08254 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP3P08254 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP3P08254 AC016734.2-201ENST00000624325 1377 ntBASIC20.96■□□□□ 0.95
MMP3P08254 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP3P08254 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
MMP3P08254 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 BX276092.5-203ENST00000456199 560 ntBASIC20.95■□□□□ 0.94
MMP3P08254 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.95■□□□□ 0.94
MMP3P08254 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP3P08254 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.95■□□□□ 0.94
MMP3P08254 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.95■□□□□ 0.94
MMP3P08254 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
MMP3P08254 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.95■□□□□ 0.94
MMP3P08254 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
MMP3P08254 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.95■□□□□ 0.94
MMP3P08254 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.95■□□□□ 0.94
MMP3P08254 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
MMP3P08254 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MMP3P08254 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP3P08254 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP3P08254 AL391807.1-203ENST00000604392 2365 ntBASIC20.94■□□□□ 0.94
MMP3P08254 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
MMP3P08254 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP3P08254 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.94■□□□□ 0.94
MMP3P08254 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MMP3P08254 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP3P08254 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.94■□□□□ 0.94
MMP3P08254 KRT18P23-201ENST00000435622 1283 ntBASIC20.94■□□□□ 0.94
MMP3P08254 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.94■□□□□ 0.94
MMP3P08254 MIR3180-1-201ENST00000580374 94 ntBASIC20.94■□□□□ 0.94
MMP3P08254 MIR3180-3-201ENST00000584616 94 ntBASIC20.94■□□□□ 0.94
MMP3P08254 AC092329.2-201ENST00000598402 547 ntBASIC20.94■□□□□ 0.94
MMP3P08254 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP3P08254 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MMP3P08254 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.94■□□□□ 0.94
MMP3P08254 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP3P08254 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP3P08254 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP3P08254 PCDHAC2-203ENST00000615316 3011 ntBASIC20.93■□□□□ 0.94
MMP3P08254 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
MMP3P08254 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MMP3P08254 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP3P08254 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MMP3P08254 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP3P08254 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP3P08254 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP3P08254 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.93■□□□□ 0.94
MMP3P08254 AP002383.4-201ENST00000442518 975 ntBASIC20.93■□□□□ 0.94
MMP3P08254 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
MMP3P08254 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.93■□□□□ 0.94
MMP3P08254 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.93■□□□□ 0.94
MMP3P08254 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
MMP3P08254 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.93■□□□□ 0.94
MMP3P08254 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.93■□□□□ 0.94
MMP3P08254 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.93■□□□□ 0.94
MMP3P08254 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.93■□□□□ 0.94
MMP3P08254 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms