Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PDGFAP04085 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PDGFAP04085 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.68■□□□□ 0.42
PDGFAP04085 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PDGFAP04085 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.68■□□□□ 0.42
PDGFAP04085 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PDGFAP04085 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.68■□□□□ 0.42
PDGFAP04085 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.68■□□□□ 0.42
PDGFAP04085 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PDGFAP04085 AC012313.10-201ENST00000623509 926 ntBASIC17.68■□□□□ 0.42
PDGFAP04085 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFAP04085 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.67■□□□□ 0.42
PDGFAP04085 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.67■□□□□ 0.42
PDGFAP04085 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.67■□□□□ 0.42
PDGFAP04085 VENTXP5-201ENST00000523979 775 ntBASIC17.67■□□□□ 0.42
PDGFAP04085 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.67■□□□□ 0.42
PDGFAP04085 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PDGFAP04085 AC069148.1-201ENST00000608741 768 ntBASIC17.67■□□□□ 0.42
PDGFAP04085 AC083849.1-201ENST00000615227 514 ntBASIC17.67■□□□□ 0.42
PDGFAP04085 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.67■□□□□ 0.42
PDGFAP04085 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.67■□□□□ 0.42
PDGFAP04085 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.67■□□□□ 0.42
PDGFAP04085 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFAP04085 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PDGFAP04085 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.66■□□□□ 0.42
PDGFAP04085 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.66■□□□□ 0.42
PDGFAP04085 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFAP04085 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.66■□□□□ 0.42
PDGFAP04085 AC112907.2-201ENST00000448639 330 ntBASIC17.66■□□□□ 0.42
PDGFAP04085 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.66■□□□□ 0.42
PDGFAP04085 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.66■□□□□ 0.42
PDGFAP04085 AL136038.3-201ENST00000561909 1096 ntBASIC17.66■□□□□ 0.42
PDGFAP04085 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.66■□□□□ 0.42
PDGFAP04085 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFAP04085 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.66■□□□□ 0.42
PDGFAP04085 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.66■□□□□ 0.42
PDGFAP04085 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.66■□□□□ 0.42
PDGFAP04085 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFAP04085 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.66■□□□□ 0.42
PDGFAP04085 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFAP04085 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.66■□□□□ 0.42
PDGFAP04085 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.66■□□□□ 0.42
PDGFAP04085 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PDGFAP04085 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFAP04085 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFAP04085 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFAP04085 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.65■□□□□ 0.42
PDGFAP04085 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFAP04085 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFAP04085 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.65■□□□□ 0.42
PDGFAP04085 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
PDGFAP04085 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFAP04085 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.65■□□□□ 0.42
PDGFAP04085 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.65■□□□□ 0.42
PDGFAP04085 HYMAI.1-201ENST00000620949 238 ntBASIC17.65■□□□□ 0.42
PDGFAP04085 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.65■□□□□ 0.42
PDGFAP04085 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
PDGFAP04085 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.65■□□□□ 0.42
PDGFAP04085 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PDGFAP04085 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PDGFAP04085 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PDGFAP04085 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFAP04085 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFAP04085 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFAP04085 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms