Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CBX6O95503 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX6O95503 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.86■□□□□ 0.61
CBX6O95503 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.86■□□□□ 0.61
CBX6O95503 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.86■□□□□ 0.61
CBX6O95503 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.86■□□□□ 0.61
CBX6O95503 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.86■□□□□ 0.61
CBX6O95503 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX6O95503 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX6O95503 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.86■□□□□ 0.61
CBX6O95503 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.86■□□□□ 0.61
CBX6O95503 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CBX6O95503 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CBX6O95503 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX6O95503 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.85■□□□□ 0.61
CBX6O95503 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.85■□□□□ 0.61
CBX6O95503 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX6O95503 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 KRT8P20-201ENST00000423953 1409 ntBASIC18.85■□□□□ 0.61
CBX6O95503 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CBX6O95503 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX6O95503 MIR718-201ENST00000390190 70 ntBASIC18.85■□□□□ 0.61
CBX6O95503 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.85■□□□□ 0.61
CBX6O95503 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.85■□□□□ 0.61
CBX6O95503 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.85■□□□□ 0.61
CBX6O95503 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX6O95503 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX6O95503 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CBX6O95503 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.85■□□□□ 0.61
CBX6O95503 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX6O95503 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.85■□□□□ 0.61
CBX6O95503 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX6O95503 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CBX6O95503 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.84■□□□□ 0.61
CBX6O95503 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.84■□□□□ 0.61
CBX6O95503 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX6O95503 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.84■□□□□ 0.61
CBX6O95503 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.84■□□□□ 0.61
CBX6O95503 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.84■□□□□ 0.61
CBX6O95503 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.84■□□□□ 0.61
CBX6O95503 AC060766.5-201ENST00000590539 871 ntBASIC18.84■□□□□ 0.61
CBX6O95503 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX6O95503 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX6O95503 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX6O95503 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CBX6O95503 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX6O95503 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CBX6O95503 KRT17P1-201ENST00000399211 1546 ntBASIC18.84■□□□□ 0.61
CBX6O95503 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBX6O95503 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX6O95503 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.83■□□□□ 0.61
CBX6O95503 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CBX6O95503 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CBX6O95503 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX6O95503 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBX6O95503 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX6O95503 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX6O95503 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBX6O95503 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CBX6O95503 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX6O95503 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
CBX6O95503 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX6O95503 RPPH1-201ENST00000516869 333 ntBASIC18.83■□□□□ 0.6
CBX6O95503 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.83■□□□□ 0.6
CBX6O95503 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.83■□□□□ 0.6
CBX6O95503 MIR4497-201ENST00000583208 89 ntBASIC18.83■□□□□ 0.6
CBX6O95503 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.83■□□□□ 0.6
CBX6O95503 HLA-B-256ENST00000639848 1089 ntBASIC18.83■□□□□ 0.6
CBX6O95503 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX6O95503 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CBX6O95503 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX6O95503 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.83■□□□□ 0.6
CBX6O95503 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.83■□□□□ 0.6
CBX6O95503 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.83■□□□□ 0.6
CBX6O95503 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX6O95503 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.82■□□□□ 0.6
CBX6O95503 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.82■□□□□ 0.6
CBX6O95503 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX6O95503 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms