Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.88■□□□□ 0.77
BEST1O76090 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.88■□□□□ 0.77
BEST1O76090 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.88■□□□□ 0.77
BEST1O76090 CR769767.2-201ENST00000622735 460 ntBASIC19.88■□□□□ 0.77
BEST1O76090 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
BEST1O76090 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.87■□□□□ 0.77
BEST1O76090 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.87■□□□□ 0.77
BEST1O76090 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.87■□□□□ 0.77
BEST1O76090 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BEST1O76090 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BEST1O76090 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
BEST1O76090 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.87■□□□□ 0.77
BEST1O76090 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BEST1O76090 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
BEST1O76090 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BEST1O76090 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
BEST1O76090 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.87■□□□□ 0.77
BEST1O76090 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
BEST1O76090 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BEST1O76090 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
BEST1O76090 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BEST1O76090 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
BEST1O76090 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
BEST1O76090 RCC2P3-201ENST00000418112 1537 ntBASIC19.86■□□□□ 0.77
BEST1O76090 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.86■□□□□ 0.77
BEST1O76090 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.86■□□□□ 0.77
BEST1O76090 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
BEST1O76090 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.86■□□□□ 0.77
BEST1O76090 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
BEST1O76090 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 AC117947.1-201ENST00000427448 529 ntBASIC19.86■□□□□ 0.77
BEST1O76090 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.86■□□□□ 0.77
BEST1O76090 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.86■□□□□ 0.77
BEST1O76090 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
BEST1O76090 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST1O76090 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
BEST1O76090 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.86■□□□□ 0.77
BEST1O76090 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
BEST1O76090 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
BEST1O76090 KRT8P32-201ENST00000512863 1461 ntBASIC19.86■□□□□ 0.77
BEST1O76090 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.85■□□□□ 0.77
BEST1O76090 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
BEST1O76090 AC008556.1-201ENST00000610908 2040 ntBASIC19.85■□□□□ 0.77
BEST1O76090 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BEST1O76090 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BEST1O76090 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BEST1O76090 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.85■□□□□ 0.77
BEST1O76090 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.85■□□□□ 0.77
BEST1O76090 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.85■□□□□ 0.77
BEST1O76090 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BEST1O76090 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
BEST1O76090 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
BEST1O76090 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.85■□□□□ 0.77
BEST1O76090 AC139887.4-201ENST00000607877 719 ntBASIC19.85■□□□□ 0.77
BEST1O76090 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BEST1O76090 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BEST1O76090 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BEST1O76090 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.85■□□□□ 0.77
BEST1O76090 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
BEST1O76090 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BEST1O76090 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BEST1O76090 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
BEST1O76090 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.84■□□□□ 0.77
BEST1O76090 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.84■□□□□ 0.77
BEST1O76090 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
BEST1O76090 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.84■□□□□ 0.77
BEST1O76090 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 AC036111.1-201ENST00000533973 1582 ntBASIC19.84■□□□□ 0.77
BEST1O76090 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
BEST1O76090 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 AC009947.2-201ENST00000444014 672 ntBASIC19.84■□□□□ 0.77
BEST1O76090 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.84■□□□□ 0.77
BEST1O76090 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms